RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 JMJD4Q9H9V9 463 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 KCNH4Q9UQ05 1017 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 KIF3AQ9Y496 699 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 V9GY48 417 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 RBBP6Q7Z6E9 1792 aaKnown RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 A0A0G2JLL6 359 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-219ENST00000617757 hCG_1642624A0A1W2PR95 340 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 CXCL11O14625 94 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 IRF6O14896 467 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PLA2G6O60733 806 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PDCP20941 246 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 SLC16A2P36021 539 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 GJA5P36382 358 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 STAT2P52630 851 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PRRT2Q7Z6L0 340 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-219ENST00000617757 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 CHURC1Q8WUH1 139 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PIBF1Q8WXW3 757 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 WASF1Q92558 559 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 MTMR8Q96EF0 704 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 WNK4Q96J92 1243 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 PIGSQ96S52 555 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 ALG1Q9BT22 464 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 VAT1LQ9HCJ6 419 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 TMOD4Q9NZQ9 345 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
TARDBP-219ENST00000617757 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
TARDBP-219ENST00000617757 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
TARDBP-219ENST00000617757 STX6O43752 255 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
TARDBP-219ENST00000617757 VCAM1P19320 739 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 FOSBP53539 338 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 HUNKP57058 714 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 IKQ13123 557 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-219ENST00000617757 PKP1Q13835 747 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 SYDE2Q5VT97 1194 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 HOMER1Q86YM7 354 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 RGS22Q8NE09 1264 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 RRP36Q96EU6 259 aaKnown RBP9.33□□□□□ -0.92
TARDBP-219ENST00000617757 RPAP3Q9H6T3 665 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-219ENST00000617757 CHMP5Q9NZZ3 219 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
TARDBP-219ENST00000617757 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 VPS37CA5D8V6 355 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-219ENST00000617757 BRD1O95696 1058 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 SCG2P13521 617 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 NUCB2P80303 420 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 FSTL1Q12841 308 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 MOGSQ13724 837 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 KRT40Q6A162 431 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 OTUD7BQ6GQQ9 843 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 SAPCD2Q86UD0 394 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 PRPF38AQ8NAV1 312 aaKnown RBP9.32□□□□□ -0.92
TARDBP-219ENST00000617757 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-219ENST00000617757 FBXO18Q8NFZ0 1043 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 SHISA4Q96DD7 197 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 C8orf76Q96K31 380 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 TANGO6Q9C0B7 1094 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 GJB4Q9NTQ9 266 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 SEC63Q9UGP8 760 aaKnown RBP9.32□□□□□ -0.92
TARDBP-219ENST00000617757 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
TARDBP-219ENST00000617757 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
TARDBP-219ENST00000617757 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L15C9J2P7 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L13C9JLJ4 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L11C9JVI0 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L18D6R9N7 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L22D6RA61 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L17D6RBQ6 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L19D6RCP7 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L20D6RJB6 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 H3BQV1 296 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 STXBP3O00186 592 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 ZBTB5O15062 677 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 FLOT1O75955 427 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-219ENST00000617757 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-219ENST00000617757 XBP1P17861 261 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 SNAP25P60880 206 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 USP17L24Q0WX57 530 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-219ENST00000617757 QRICH1Q2TAL8 776 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 WWC2Q6AWC2 1192 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 RGMBQ6NW40 437 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
TARDBP-219ENST00000617757 SLF1Q9BQI6 1058 aa9.31□□□□□ -0.92
TARDBP-219ENST00000617757 RANBP17Q9H2T7 1088 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms