RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
AP003900.1-202ENST00000616952 HIPK3Q9H422 1215 aa12.89□□□□□ -0.35
AP003900.1-202ENST00000616952 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
AP003900.1-202ENST00000616952 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
AP003900.1-202ENST00000616952 WDR87Q6ZQQ6 2873 aa12.89□□□□□ -0.35
AP003900.1-202ENST00000616952 ELP1O95163 1332 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 NBL1P41271 181 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 ZNF292O60281 2723 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
AP003900.1-202ENST00000616952 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 USP24Q9UPU5 2620 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 COBLO75128 1261 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 CCL23P55773 120 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
AP003900.1-202ENST00000616952 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 ARVCFO00192 962 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 STRNO43815 780 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 CD4P01730 458 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 KCNA10Q16322 511 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
AP003900.1-202ENST00000616952 KDM4AO75164 1064 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 ASNSP08243 561 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 AKR1A1P14550 325 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 LBX2Q6XYB7 198 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 KLHDC9Q8NEP7 349 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 VWCEQ96DN2 955 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
AP003900.1-202ENST00000616952 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
AP003900.1-202ENST00000616952 MAP1BP46821 2468 aaKnown RBP12.84□□□□□ -0.35
AP003900.1-202ENST00000616952 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 PFKMP08237 780 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 AVPR2P30518 371 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 HERC6Q8IVU3 1022 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 NOC4LQ9BVI4 516 aaKnown RBP12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 MOV10L1Q9BXT6 1211 aaKnown RBP12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
AP003900.1-202ENST00000616952 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 ASGR1P07306 291 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 CST5P28325 142 aaPredicted RBP12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 JAG1P78504 1218 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 METTL24Q5JXM2 366 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 USP17L2Q6R6M4 530 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 C12orf42Q96LP6 360 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
AP003900.1-202ENST00000616952 PDE8BO95263 885 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 ZNF865P0CJ78 1059 aaPredicted RBP12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 ERCC3P19447 782 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 BTDP43251 543 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 FRMD5Q7Z6J6 570 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 SCLYQ96I15 445 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 SUGCTQ9HAC7 445 aa12.81□□□□□ -0.36
AP003900.1-202ENST00000616952 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms