RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 TMEM67Q5HYA8 995 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 TXNRD3Q86VQ6 643 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 GAS2L3Q86XJ1 694 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
MALAT1-208ENST00000616527 MIGA1Q8NAN2 632 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 WASF1Q92558 559 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 ZNF396Q96N95 335 aaPredicted RBP9.15□□□□□ -0.94
MALAT1-208ENST00000616527 CD209Q9NNX6 404 aa9.15□□□□□ -0.94
MALAT1-208ENST00000616527 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
MALAT1-208ENST00000616527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
MALAT1-208ENST00000616527 ERICH2A1L162 156 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 PRDX5P30044 214 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 PTSQ03393 145 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 SEC23AQ15436 765 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 CTR9Q6PD62 1173 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 CHST3Q7LGC8 479 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 TBC1D16Q8TBP0 767 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 LEO1Q8WVC0 666 aaPredicted RBP9.14□□□□□ -0.95
MALAT1-208ENST00000616527 ANKS1AQ92625 1134 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 COA1Q9GZY4 146 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 NCOA5Q9HCD5 579 aaKnown RBP9.14□□□□□ -0.95
MALAT1-208ENST00000616527 DCP1AQ9NPI6 582 aaPredicted RBP9.14□□□□□ -0.95
MALAT1-208ENST00000616527 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
MALAT1-208ENST00000616527 IQSEC3Q9UPP2 1182 aaPredicted RBP9.14□□□□□ -0.95
MALAT1-208ENST00000616527 SLC12A7Q9Y666 1083 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 TACC3Q9Y6A5 838 aa9.14□□□□□ -0.95
MALAT1-208ENST00000616527 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 GAKO14976 1311 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 GPR75-ASB3A0A0A6YYF3 556 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CCDC69A6NI79 296 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 FIBPO43427 364 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 UFL1O94874 794 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CALM1P0DP23 149 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CALM2P0DP24 149 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CALM3P0DP25 149 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 FKBP1AP62942 108 aaKnown RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 WTAPQ15007 396 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 IQCA1Q86XH1 822 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 MASTLQ96GX5 879 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 CHAMP1Q96JM3 812 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 C8orf76Q96K31 380 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 UCN2Q96RP3 112 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 MAP3K14Q99558 947 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 UBAC1Q9BSL1 405 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 MRIQ9BWK5 157 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 TCP11L1Q9NUJ3 509 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 DDX19AQ9NUU7 478 aaKnown RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 RTEL1Q9NZ71 1219 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 NSFL1CQ9UNZ2 370 aaKnown RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 PARP3Q9Y6F1 533 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
MALAT1-208ENST00000616527 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
MALAT1-208ENST00000616527 MAST2Q6P0Q8 1798 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 CASZ1Q86V15 1759 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 KIAA1551Q9HCM1 1747 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 GOLGA8AA7E2F4 631 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 USP17L12C9JPN9 530 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 USP17L21D6R901 530 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 DDAH1O94760 285 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 YEATS4O95619 227 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 RFX1P22670 979 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 IARSP41252 1262 aaKnown RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 DYNLL1P63167 89 aaKnown RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 PDE4BQ07343 736 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 UVSSAQ2YD98 709 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 NFXL1Q6ZNB6 911 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 RBM43Q6ZSC3 357 aaKnown RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 FAM177A1Q8N128 213 aaPredicted RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 SDR42E1Q8WUS8 393 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 CAMKK2Q96RR4 588 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 ZSCAN10Q96SZ4 725 aaPredicted RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 NOL10Q9BSC4 688 aaKnown RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 PPP1R12CQ9BZL4 782 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 ZNF287Q9HBT7 754 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 RBM28Q9NW13 759 aaKnown RBP9.12□□□□□ -0.95
MALAT1-208ENST00000616527 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
MALAT1-208ENST00000616527 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 MMP10P09238 476 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.951e-323■□□□□ 9.1
MALAT1-208ENST00000616527 CDC27P30260 824 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 NASPP49321 788 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms