RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
SSBP2-220ENST00000615665 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
SSBP2-220ENST00000615665 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 NT5C2P49902 561 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 PFKFB3Q16875 520 aaPredicted RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 GLT8D2Q9H1C3 349 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 BCL9O00512 1426 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 USP27XA6NNY8 438 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 LAD1O00515 517 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 SERPINB2P05120 415 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 NSUN4Q96CB9 384 aaKnown RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 ORC4O43929 436 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 CASP14P31944 242 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 SLC1A4P43007 532 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 OR8K1Q8NGG5 319 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 GPR101Q96P66 508 aaPredicted RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 TMEM232C9JQI7 657 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 ARL6IP4Q66PJ3 421 aaKnown RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 PPP1R1BQ9UD71 204 aaPredicted RBP15.7■□□□□ 0.1
SSBP2-220ENST00000615665 SALL1Q9NSC2 1324 aa15.7■□□□□ 0.1
SSBP2-220ENST00000615665 GOLGA6L10A6NI86 522 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 TUBE1Q9UJT0 475 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 SF3B2Q13435 895 aaKnown RBP15.69■□□□□ 0.1
SSBP2-220ENST00000615665 ZNF658Q5TYW1 1059 aaPredicted RBP15.69■□□□□ 0.1
SSBP2-220ENST00000615665 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 CASP1P29466 404 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
SSBP2-220ENST00000615665 MACROD2A1Z1Q3 448 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 BBOX1O75936 387 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
SSBP2-220ENST00000615665 RBL2Q08999 1139 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 TUBBP07437 444 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 DNM2P50570 870 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 ARID5AQ03989 594 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 TCP10Q12799 353 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 ARHGEF1Q92888 912 aaKnown RBP15.68■□□□□ 0.1
SSBP2-220ENST00000615665 JAKMIP2Q96AA8 810 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 JCADQ9P266 1359 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 ARMCX5Q6P1M9 558 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 SH3GLB2Q9NR46 395 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 TCRBV5S4A2TA0A5A2 114 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 EFCAB8A8MWE9 144 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 TSGA10Q9BZW7 698 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 CUEDC2Q9H467 287 aa15.68■□□□□ 0.1
SSBP2-220ENST00000615665 ERLIN2O94905 339 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 SCNN1DP51172 638 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 AK8Q96MA6 479 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 RWDD2AQ9UIY3 292 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 CCZ1BP86790 482 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 CCZ1P86791 482 aaPredicted RBP15.67■□□□□ 0.1
SSBP2-220ENST00000615665 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
SSBP2-220ENST00000615665 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 VGLL2Q8N8G2 317 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
SSBP2-220ENST00000615665 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 ALDH1B1P30837 517 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 CDK8P49336 464 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 HAUS3Q68CZ6 603 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
SSBP2-220ENST00000615665 UBE2Q2LH0YL09 131 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
SSBP2-220ENST00000615665 PTPAQ15257 358 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 LMAN1P49257 510 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 DOK7Q18PE1 504 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 SRBD1Q8N5C6 995 aaKnown RBP15.66■□□□□ 0.1
SSBP2-220ENST00000615665 GPR161Q8N6U8 529 aaKnown RBP15.66■□□□□ 0.1
SSBP2-220ENST00000615665 SLC4A9Q96Q91 983 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 PIGSQ96S52 555 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 CENPHQ9H3R5 247 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 TAF3Q5VWG9 929 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 SLC44A5Q8NCS7 719 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 DPF2Q92785 391 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 TMCO5BA8MYB1 307 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 ASPRV1Q53RT3 343 aa15.66■□□□□ 0.1
SSBP2-220ENST00000615665 HERC4Q5GLZ8 1057 aaPredicted RBP15.66■□□□□ 0.1
SSBP2-220ENST00000615665 RIC1Q4ADV7 1423 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 SPATA31A5Q5VU36 1347 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 SPATA31A7Q8IWB4 1347 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 ERCC3P19447 782 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 ZFYVE27Q5T4F4 411 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 CCDC84Q86UT8 332 aaPredicted RBP15.65■□□□□ 0.1
SSBP2-220ENST00000615665 PLCD3Q8N3E9 789 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 TBCKQ8TEA7 893 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 EEF2KMTQ96G04 330 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 TMEM47Q9BQJ4 181 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 DISC1Q9NRI5 854 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 ANAPC4Q9UJX5 808 aa15.65■□□□□ 0.1
SSBP2-220ENST00000615665 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms