RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 TTLL1O95922 423 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 TOP1P11387 765 aaKnown RBP13.32□□□□□ -0.28
SLIRP-212ENST00000613856 TROAPQ12815 778 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 TMEM47Q9BQJ4 181 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
SLIRP-212ENST00000613856 NAP1L2Q9ULW6 460 aaPredicted RBP13.32□□□□□ -0.28
SLIRP-212ENST00000613856 SYNPO2Q9UMS6 1093 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 NR2E3Q9Y5X4 410 aa13.32□□□□□ -0.28
SLIRP-212ENST00000613856 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 PHF20L1A8MW92 1017 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 MPHOSPH10O00566 681 aaKnown RBP13.31□□□□□ -0.28
SLIRP-212ENST00000613856 EVI5O60447 810 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 SGPL1O95470 568 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 INHAP05111 366 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 PPATQ06203 517 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
SLIRP-212ENST00000613856 RTN1Q16799 776 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 SPRYD3Q8NCJ5 442 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
SLIRP-212ENST00000613856 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 CABP5Q9NP86 173 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
SLIRP-212ENST00000613856 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-212ENST00000613856 ZBTB21Q9ULJ3 1066 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 SMC3Q9UQE7 1217 aa13.31□□□□□ -0.28
SLIRP-212ENST00000613856 ADCY3O60266 1144 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 CDKL5O76039 1030 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 GDF11O95390 407 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 CTDNEP1O95476 244 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 GH2P01242 217 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 CAP2P40123 477 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 FLT3LGP49771 235 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 ICA1Q05084 483 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 MKL1Q969V6 931 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 PAWRQ96IZ0 340 aaKnown RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 MYL10Q9BUA6 226 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 ZNF112Q9UJU3 913 aa13.3□□□□□ -0.28
SLIRP-212ENST00000613856 ZMYND8Q9ULU4 1186 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-212ENST00000613856 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
SLIRP-212ENST00000613856 VCANP13611 3396 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 CPLX1O14810 134 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 ASNSP08243 561 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 RXRAP19793 462 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 HOXD10P28358 340 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 CDC27P30260 824 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 KIF5BP33176 963 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 UBXN2AP68543 259 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 JAG1P78504 1218 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 GRM4Q14833 912 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 SEPT2Q15019 361 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 NTRK3Q16288 839 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 CCDC84Q86UT8 332 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-212ENST00000613856 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-212ENST00000613856 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 GDF15Q99988 308 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 PLXNB2O15031 1838 aa13.29□□□□□ -0.28
SLIRP-212ENST00000613856 JAK2O60674 1132 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 CTNND1O60716 968 aaKnown RBP13.28□□□□□ -0.28
SLIRP-212ENST00000613856 SNHG28P0DPA3 235 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
SLIRP-212ENST00000613856 IFNAR1P17181 557 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 SYN1P17600 705 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 GJB2P29033 226 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 FCGRTP55899 365 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-212ENST00000613856 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
SLIRP-212ENST00000613856 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 C7orf61Q8IZ16 206 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
SLIRP-212ENST00000613856 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
SLIRP-212ENST00000613856 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
SLIRP-212ENST00000613856 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
SLIRP-212ENST00000613856 PDCP20941 246 aa13.27□□□□□ -0.29
SLIRP-212ENST00000613856 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
SLIRP-212ENST00000613856 GNAQP50148 359 aa13.27□□□□□ -0.29
SLIRP-212ENST00000613856 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-212ENST00000613856 TRIM32Q13049 653 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms