RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LRRC2Q9BYS8 371 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 TNPO2O14787 897 aaKnown RBP15.47■□□□□ 0.07
MDC1-209ENST00000613547 DHX16O60231 1041 aaKnown RBP15.47■□□□□ 0.07
MDC1-209ENST00000613547 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
MDC1-209ENST00000613547 GOLGA8HP0CJ92 632 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 HOXD10P28358 340 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 MAPK4P31152 587 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 COPB2P35606 906 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 COL9A3Q14050 684 aaPredicted RBP15.47■□□□□ 0.07
MDC1-209ENST00000613547 SYDE2Q5VT97 1194 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 BTNL9Q6UXG8 535 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 MAP3K14Q99558 947 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
MDC1-209ENST00000613547 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 ADAMTS5Q9UNA0 930 aa15.47■□□□□ 0.07
MDC1-209ENST00000613547 PCNTO95613 3336 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 KLRF2D3W0D1 207 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 CNMDO75829 334 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 CPA1P15085 419 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 SLC16A2P36021 539 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 PSMC4P43686 418 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 OAZ1P54368 228 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 TROAPQ12815 778 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 GRM4Q14833 912 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 Q6ZUG5 572 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 CTU1Q7Z7A3 348 aaKnown RBP15.46■□□□□ 0.07
MDC1-209ENST00000613547 COA7Q96BR5 231 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 TEX13BQ9BXU2 312 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 C22orf23Q9BZE7 217 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 UPF3BQ9BZI7 483 aaKnown RBP15.46■□□□□ 0.07
MDC1-209ENST00000613547 SPATC1LQ9H0A9 340 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 SLC38A10Q9HBR0 1119 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 PRR12Q9ULL5 1215 aa15.46■□□□□ 0.07
MDC1-209ENST00000613547 NAP1L2Q9ULW6 460 aaPredicted RBP15.46■□□□□ 0.07
MDC1-209ENST00000613547 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 SLC25A27O95847 323 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 STAT3P40763 770 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 GNAQP50148 359 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 TMEM132BQ14DG7 1078 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 APOA5Q6Q788 366 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 POTEEQ6S8J3 1075 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 CPXCR1Q8N123 301 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 FBXL16Q8N461 479 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 SHCBP1Q8NEM2 672 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 BRF1Q92994 677 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 PDRG1Q9NUG6 133 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
MDC1-209ENST00000613547 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 ZBTB43O43298 467 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
MDC1-209ENST00000613547 RCAN1P53805 252 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 PRMT2P55345 433 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 Q3C1V9 767 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
MDC1-209ENST00000613547 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 NCAPG2Q86XI2 1143 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 RIOX2Q8IUF8 465 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 LZTS2Q9BRK4 669 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 MOV10L1Q9BXT6 1211 aaKnown RBP15.44■□□□□ 0.06
MDC1-209ENST00000613547 MROH8Q9H579 483 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
MDC1-209ENST00000613547 MAD2L2Q9UI95 211 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 ZNF214Q9UL59 606 aaPredicted RBP15.44■□□□□ 0.06
MDC1-209ENST00000613547 IVNS1ABPQ9Y6Y0 642 aa15.44■□□□□ 0.06
MDC1-209ENST00000613547 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
MDC1-209ENST00000613547 GOLGA8BA8MQT2 603 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 PEX10O60683 326 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 SLC4A3P48751 1232 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 RBM25P49756 843 aaKnown RBP15.43■□□□□ 0.06
MDC1-209ENST00000613547 ANKRD1Q15327 319 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
MDC1-209ENST00000613547 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 PLEKHH3Q7Z736 793 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 ADGRF4Q8IZF3 695 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 REPS2Q8NFH8 660 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 AGXT2Q9BYV1 514 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 PORCNQ9H237 461 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
MDC1-209ENST00000613547 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
MDC1-209ENST00000613547 FBXO40Q9UH90 709 aa15.43■□□□□ 0.06
MDC1-209ENST00000613547 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 ERCC3P19447 782 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 TRAF1Q13077 416 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms