RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 ESYT1Q9BSJ8 1104 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 LSG1Q9H089 658 aaKnown RBP14.94□□□□□ -0.02
CSTF1-208ENST00000613138 SENP2Q9HC62 589 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 ZSWIM5Q9P217 1185 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 MYH6P13533 1939 aa14.94□□□□□ -0.02
CSTF1-208ENST00000613138 SLC15A5A6NIM6 579 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 HMGCRP04035 888 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 CCND3P30281 292 aaPredicted RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 STAT3P40763 770 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 RGS2P41220 211 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 UBXN2AP68543 259 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 SNRNP48Q6IEG0 339 aaKnown RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 CHST3Q7LGC8 479 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 RIOX2Q8IUF8 465 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 ESR2Q92731 530 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 GMCL1Q96IK5 515 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 DEFB118Q96PH6 123 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 APBA2Q99767 749 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 RNF41Q9H4P4 317 aaPredicted RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 FEM1BQ9UK73 627 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 RBM8AQ9Y5S9 174 aaKnown RBP14.93□□□□□ -0.02
CSTF1-208ENST00000613138 ALPK3Q96L96 1907 aa14.93□□□□□ -0.02
CSTF1-208ENST00000613138 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 TOP1P11387 765 aaKnown RBP14.92□□□□□ -0.02
CSTF1-208ENST00000613138 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
CSTF1-208ENST00000613138 ZKSCAN1P17029 563 aaPredicted RBP14.92□□□□□ -0.02
CSTF1-208ENST00000613138 CYP2C19P33261 490 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 CCDC174Q6PII3 467 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
CSTF1-208ENST00000613138 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
CSTF1-208ENST00000613138 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 MAP4K1Q92918 833 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 AGBL1Q96MI9 1066 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 SLC38A10Q9HBR0 1119 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 HOMER2Q9NSB8 354 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 CTNNA3Q9UI47 895 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 IVNS1ABPQ9Y6Y0 642 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 ZNF536O15090 1300 aa14.92□□□□□ -0.02
CSTF1-208ENST00000613138 PDHBP11177 359 aa14.91□□□□□ -0.02
CSTF1-208ENST00000613138 STAT2P52630 851 aa14.91□□□□□ -0.02
CSTF1-208ENST00000613138 U2AF1L4Q8WU68 220 aaKnown RBP14.91□□□□□ -0.02
CSTF1-208ENST00000613138 ZSCAN10Q96SZ4 725 aaPredicted RBP14.91□□□□□ -0.02
CSTF1-208ENST00000613138 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
CSTF1-208ENST00000613138 GPHNQ9NQX3 736 aaPredicted RBP14.91□□□□□ -0.02
CSTF1-208ENST00000613138 PRR12Q9ULL5 1215 aa14.91□□□□□ -0.02
CSTF1-208ENST00000613138 SYNPO2Q9UMS6 1093 aa14.91□□□□□ -0.02
CSTF1-208ENST00000613138 DDX49Q9Y6V7 483 aaKnown RBP14.91□□□□□ -0.02
CSTF1-208ENST00000613138 TNKSO95271 1327 aa14.91□□□□□ -0.02
CSTF1-208ENST00000613138 E7EWF7 191 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 ZBED4O75132 1171 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
CSTF1-208ENST00000613138 GJB1P08034 283 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
CSTF1-208ENST00000613138 ANTXR2P58335 489 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 PRAMEF19Q5SWL8 479 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 MAP3K21Q5TCX8 1036 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 DIS3LQ8TF46 1054 aaKnown RBP14.9□□□□□ -0.02
CSTF1-208ENST00000613138 DCAF4Q8WV16 495 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 MMP19Q99542 508 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 TEX13BQ9BXU2 312 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 MROH8Q9H579 483 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 PAK6Q9NQU5 681 aaPredicted RBP14.9□□□□□ -0.02
CSTF1-208ENST00000613138 PCDH10Q9P2E7 1040 aa14.9□□□□□ -0.02
CSTF1-208ENST00000613138 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
CSTF1-208ENST00000613138 IGHA2P01877 340 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 PCP11498 1178 aaKnown RBP14.89□□□□□ -0.03
CSTF1-208ENST00000613138 GJA8P48165 433 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 SEC23AQ15436 765 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 MUM1L1Q5H9M0 696 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 ANO1Q5XXA6 986 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 ANO2Q9NQ90 1003 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 CEP290O15078 2479 aa14.89□□□□□ -0.03
CSTF1-208ENST00000613138 SLC27A2O14975 620 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 SGPL1O95470 568 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 SLC25A27O95847 323 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 HOXC6P09630 235 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 FCER1AP12319 257 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 SYDE2Q5VT97 1194 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 FAM160B2Q86V87 743 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 PNMA1Q8ND90 353 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 CHURC1Q8WUH1 139 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 MAML3Q96JK9 1138 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 FGD4Q96M96 766 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
CSTF1-208ENST00000613138 KRT23Q9C075 422 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 HMX1Q9NP08 348 aaPredicted RBP14.88□□□□□ -0.03
CSTF1-208ENST00000613138 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
CSTF1-208ENST00000613138 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
CSTF1-208ENST00000613138 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms