RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 ANKRD31Q8N7Z5 1873 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 ZNF622Q969S3 477 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■□□□□ 10.5
CNOT3-208ENST00000613073 EYA3Q99504 573 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 CPVLQ9H3G5 476 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 DAGLAQ9Y4D2 1042 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 PLSCR1O15162 318 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 NPR1P16066 1061 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 SERTAD1Q9UHV2 236 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
CNOT3-208ENST00000613073 SCNN1DP51172 638 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 CERS5Q8N5B7 392 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 TNFRSF25Q93038 417 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
CNOT3-208ENST00000613073 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
CNOT3-208ENST00000613073 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 ADAM21Q9UKJ8 722 aa18.66■□□□□ 0.58
CNOT3-208ENST00000613073 PLCG2P16885 1265 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 EPSTI1Q96J88 318 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 COA1Q9GZY4 146 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 G3V3G9 751 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
CNOT3-208ENST00000613073 DCAF8Q5TAQ9 597 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 CCDC150Q8NCX0 1101 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 FAM163AQ96GL9 167 aaPredicted RBP18.65■□□□□ 0.58
CNOT3-208ENST00000613073 TTF2Q9UNY4 1162 aaKnown RBP18.65■□□□□ 0.58
CNOT3-208ENST00000613073 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 FAM205AQ6ZU69 1335 aa18.65■□□□□ 0.58
CNOT3-208ENST00000613073 LOC102724159A0A0B4J2E5 919 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 H3BQF6 201 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 NRDCO43847 1150 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 PWP2Q15269 919 aaKnown RBP18.64■□□□□ 0.58
CNOT3-208ENST00000613073 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 TTC38Q5R3I4 469 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 FOXR1Q6PIV2 292 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 RASGRP4Q8TDF6 673 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 KCND1Q9NSA2 647 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 GAKO14976 1311 aa18.64■□□□□ 0.58
CNOT3-208ENST00000613073 CYTH3O43739 400 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 PRR29P0C7W0 189 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 GRM4Q14833 912 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 ANKS1AQ92625 1134 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
CNOT3-208ENST00000613073 TYW1BQ6NUM6 668 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 KCNQ5Q9NR82 932 aa18.64■□□□□ 0.57
CNOT3-208ENST00000613073 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 PDE6BP35913 854 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 PTGDRQ13258 359 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 UBXN6Q9BZV1 441 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 ARFGAP3Q9NP61 516 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 TCP11L1Q9NUJ3 509 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 EFCAB8A8MWE9 144 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 MCM7P33993 719 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 MDM2Q00987 491 aaPredicted RBP18.63■□□□□ 0.57
CNOT3-208ENST00000613073 NCAPHQ15003 741 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 POSTNQ15063 836 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 ZNF579Q8NAF0 562 aaKnown RBP18.63■□□□□ 0.57
CNOT3-208ENST00000613073 GOLGA5Q8TBA6 731 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 DHX58Q96C10 678 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 CEP95Q96GE4 821 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 BPIFA3Q9BQP9 254 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
CNOT3-208ENST00000613073 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 IMPACTQ9P2X3 320 aa18.63■□□□□ 0.57
CNOT3-208ENST00000613073 A0A087X0B3 334 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 VWA3AA6NCI4 1184 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 USP17L2Q6R6M4 530 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 HEATR3Q7Z4Q2 680 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 VPS18Q9P253 973 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 LTBP1Q14766 1721 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 SNED1Q8TER0 1413 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 ATP1A3P13637 1013 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 BMP6P22004 513 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 ICE2Q659A1 982 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 MASTLQ96GX5 879 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 DRC1Q96MC2 740 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 PARD6BQ9BYG5 372 aa18.62■□□□□ 0.57
CNOT3-208ENST00000613073 DDX4Q9NQI0 724 aaKnown RBP18.62■□□□□ 0.57
CNOT3-208ENST00000613073 LRRC37AA6NMS7 1700 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 MCM6Q14566 821 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 SYMPKQ92797 1274 aaKnown RBP18.61■□□□□ 0.57
CNOT3-208ENST00000613073 MYH1P12882 1939 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 DDX60LQ5H9U9 1706 aaKnown RBP18.61■□□□□ 0.57
CNOT3-208ENST00000613073 PHLPP2Q6ZVD8 1323 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
CNOT3-208ENST00000613073 SKIDA1Q1XH10 827 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 WWC2Q6AWC2 1192 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 BLIDQ8IZY5 108 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms