RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LY75O60449 1722 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 CDK5RAP2Q96SN8 1893 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 NRDCO43847 1150 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 SLU7O95391 586 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 ERCC5P28715 1186 aaPredicted RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 PPP4CP60510 307 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 DHX8Q14562 1220 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 TMEM260Q9NX78 707 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 DDX60LQ5H9U9 1706 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 PALM3A6NDB9 673 aaPredicted RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 USP17L5A8MUK1 530 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 IGSF3O75054 1194 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 STAT6P42226 847 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 LETM2Q2VYF4 491 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 FBXO38Q6PIJ6 1188 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 IGSF22Q8N9C0 903 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 GSDMAQ96QA5 445 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 PIGSQ96S52 555 aa15.95■□□□□ 0.14
PCDHGA3-202ENST00000612467 RGL2O15211 777 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 URI1O94763 535 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 GSTO1P78417 241 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 CDKAL1Q5VV42 579 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 AMOTL1Q8IY63 956 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 ADD3Q9UEY8 706 aaKnown RBP15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 BMP15O95972 392 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 CASP14P31944 242 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 PRCPP42785 496 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 SCNN1DP51172 638 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 NAPAP54920 295 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 JAKMIP3Q5VZ66 844 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 RAD9BQ6WBX8 426 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 BIN2Q9UBW5 565 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA3-202ENST00000612467 GPR75-ASB3A0A0A6YYF3 556 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 ABL1P00519 1130 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 CALML3P27482 149 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 FXR1P51114 621 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 ST5P78524 1137 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 KRT31Q15323 416 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 NELFBQ8WX92 580 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 ROBO3Q96MS0 1386 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 RPN1P04843 607 aaKnown RBP15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 HPS3Q969F9 1004 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 LZTFL1Q9NQ48 299 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 DDX4Q9NQI0 724 aaKnown RBP15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 PCDHAC2Q9Y5I4 1007 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 UTRNP46939 3433 aa15.93■□□□□ 0.14
PCDHGA3-202ENST00000612467 CCNT1O60563 726 aaKnown RBP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 LDHCP07864 332 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 TRAPPC10P48553 1259 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 GNG11P61952 73 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 CCDC93Q567U6 631 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 DTHD1Q6ZMT9 781 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 C16orf86Q6ZW13 317 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 CERS5Q8N5B7 392 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 ANKS1AQ92625 1134 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 COA7Q96BR5 231 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 L2HGDHQ9H9P8 463 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 DAGLAQ9Y4D2 1042 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 SMCO2A6NFE2 343 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 NKRFO15226 690 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 GTPBP6O43824 516 aaPredicted RBP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 IL1R1P14778 569 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 GJA10Q969M2 543 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 ERO1AQ96HE7 468 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 DISC1Q9NRI5 854 aa15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHGA3-202ENST00000612467 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 GYPCP04921 128 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 ATP2B4P23634 1241 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 KCNJ6P48051 423 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 CARD6Q9BX69 1037 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 MYH8P13535 1937 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 FAM196BA6NMK8 535 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 AKR1B15C9JRZ8 316 aaPredicted RBP15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 AKR1B1P15121 316 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 GPCPD1Q9NPB8 672 aa15.91■□□□□ 0.14
PCDHGA3-202ENST00000612467 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 N4BP3O15049 544 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 PBX1P40424 430 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 CACNB3P54284 484 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 PAK1Q13153 545 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 TXNRD1Q16881 649 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 CERKQ8TCT0 537 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 ZBTB9Q96C00 473 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 CCDC34Q96HJ3 373 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 MYH1P12882 1939 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms