RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PBX1P40424 430 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 TMTC1Q8IUR5 882 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 CEP112Q8N8E3 955 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 SMCR8Q8TEV9 937 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-207ENST00000612273 PKD1L3Q7Z443 1732 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 KCTD19Q17RG1 926 aaPredicted RBP15.81■□□□□ 0.12
COL6A1-207ENST00000612273 PDXDC2PQ6P474 469 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 DTHD1Q6ZMT9 781 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 BLIDQ8IZY5 108 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
COL6A1-207ENST00000612273 MYO6Q9UM54 1294 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 ADAMTSL3P82987 1691 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 ENOX2Q16206 610 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 E2F4Q16254 413 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 KRT26Q7Z3Y9 468 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 PNMA1Q8ND90 353 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 CRNKL1Q9BZJ0 848 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 GTPBP6O43824 516 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 NDUFA10O95299 355 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 ATP1A1P05023 1023 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 ARHGAP25P42331 645 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 BEND6Q5SZJ8 279 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 ANKRD13CQ8N6S4 541 aa15.8■□□□□ 0.12
COL6A1-207ENST00000612273 NSUN4Q96CB9 384 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 MAGEC2Q9UBF1 373 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
COL6A1-207ENST00000612273 HSP90B2PQ58FF3 399 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 BBXQ8WY36 941 aaPredicted RBP15.79■□□□□ 0.12
COL6A1-207ENST00000612273 TNFRSF25Q93038 417 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 MYH2Q9UKX2 1941 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 TRIM66O15016 1216 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 FOXR1Q6PIV2 292 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 IRF2BP1Q8IU81 584 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 CSGALNACT2Q8N6G5 542 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 REXO2Q9Y3B8 237 aaKnown RBP15.79■□□□□ 0.12
COL6A1-207ENST00000612273 ZPR1O75312 459 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 FCER1AP12319 257 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 MTIF2P46199 727 aaKnown RBP15.79■□□□□ 0.12
COL6A1-207ENST00000612273 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
COL6A1-207ENST00000612273 MMS19Q96T76 1030 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
COL6A1-207ENST00000612273 ERLIN1O75477 346 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 HIBADHP31937 336 aaKnown RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 ASIC1P78348 528 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 TBC1D8BQ0IIM8 1120 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 CASP8Q14790 479 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 TAF3Q5VWG9 929 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 HDXQ7Z353 690 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 SMARCAL1Q9NZC9 954 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 SLIT2O94813 1529 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 RAD21O60216 631 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 CXCR5P32302 372 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 OR8K1Q8NGG5 319 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 AK7Q96M32 723 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 MYH7P12883 1935 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 COL1A1P02452 1464 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 LRRIQ3A6PVS8 624 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 BMP15O95972 392 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 PLEKP08567 350 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 CALM1P0DP23 149 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 CALM2P0DP24 149 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 CALM3P0DP25 149 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 TECP42680 631 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 PDE4DQ08499 809 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 FAM207AQ9NSI2 230 aaPredicted RBP15.78■□□□□ 0.12
COL6A1-207ENST00000612273 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
COL6A1-207ENST00000612273 RCCD1A6NED2 376 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
COL6A1-207ENST00000612273 TSPY3P0CV98 308 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 TSPY8P0CW00 308 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 IDEP14735 1019 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 BRD3Q15059 726 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 RCSD1Q6JBY9 416 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 ELOA2Q8IYF1 753 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-207ENST00000612273 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 UBA5Q9GZZ9 404 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 POLD4Q9HCU8 107 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 DISC1Q9NRI5 854 aa15.77■□□□□ 0.12
COL6A1-207ENST00000612273 IPO7O95373 1038 aaKnown RBP15.77■□□□□ 0.11
COL6A1-207ENST00000612273 GRIK5Q16478 980 aa15.77■□□□□ 0.11
COL6A1-207ENST00000612273 NAALADL2Q58DX5 795 aa15.77■□□□□ 0.11
COL6A1-207ENST00000612273 MB21D1Q8N884 522 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms