RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 CDKL5O76039 1030 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 TOP1P11387 765 aaKnown RBP22.59■■□□□ 1.21
SRRM3-205ENST00000612155 NOVP48745 357 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 TYRO3Q06418 890 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 MTMR2Q13614 643 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 CMTR1Q8N1G2 835 aaKnown RBP22.59■■□□□ 1.21
SRRM3-205ENST00000612155 ENGASEQ8NFI3 743 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 NUP88Q99567 741 aaPredicted RBP22.59■■□□□ 1.21
SRRM3-205ENST00000612155 PCDHA7Q9UN72 937 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 GOLGA8HP0CJ92 632 aa22.58■■□□□ 1.21
SRRM3-205ENST00000612155 OPTNQ96CV9 577 aa22.58■■□□□ 1.21
SRRM3-205ENST00000612155 FEZ1Q99689 392 aa22.58■■□□□ 1.21
SRRM3-205ENST00000612155 USP25Q9UHP3 1055 aa22.58■■□□□ 1.21
SRRM3-205ENST00000612155 CCDC192P0DO97 292 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 GJA5P36382 358 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 BRAPQ7Z569 592 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 NBPF11Q86T75 865 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 RGS22Q8NE09 1264 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 ANKS1AQ92625 1134 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 SLC10A4Q96EP9 437 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 SLC26A6Q9BXS9 759 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.57■■□□□ 1.2
SRRM3-205ENST00000612155 PHIPQ8WWQ0 1821 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 FRMPD2Q68DX3 1309 aaPredicted RBP22.57■■□□□ 1.2
SRRM3-205ENST00000612155 IRF6O14896 467 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 FMNL1O95466 1100 aaPredicted RBP22.57■■□□□ 1.2
SRRM3-205ENST00000612155 IFNAR1P17181 557 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 TROAPQ12815 778 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 USP17L2Q6R6M4 530 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 CATIPQ7Z7H3 387 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 CPVLQ9H3G5 476 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 ARHGEF10LQ9HCE6 1279 aa22.57■■□□□ 1.2
SRRM3-205ENST00000612155 STK36Q9NRP7 1315 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 CLCN1P35523 988 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 ME1P48163 572 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 RTN1Q16799 776 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 CCDC178Q5BJE1 867 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 CCDC82Q8N4S0 544 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 POLR3EQ9NVU0 708 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 F5H6K3 240 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 KLRC3Q07444 240 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 CPLX2Q6PUV4 134 aaKnown RBP22.56■■□□□ 1.2
SRRM3-205ENST00000612155 SAPCD2Q86UD0 394 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 TMTC2Q8N394 836 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 STAG2Q8N3U4 1231 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 ZNF280CQ8ND82 737 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 ABT1Q9ULW3 272 aaKnown RBP22.56■■□□□ 1.2
SRRM3-205ENST00000612155 TMX2Q9Y320 296 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
SRRM3-205ENST00000612155 NT5C2P49902 561 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 HMGCS2P54868 508 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 SSRP1Q08945 709 aaKnown RBP22.55■■□□□ 1.2
SRRM3-205ENST00000612155 KCTD1Q719H9 257 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 MKL1Q969V6 931 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 FKBP1BP68106 108 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 FSIP1Q8NA03 581 aa22.55■■□□□ 1.2
SRRM3-205ENST00000612155 SPDYE5A6NIY4 337 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 USP17L10C9JJH3 530 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 NDUFB10O96000 172 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 HTRA3P83110 453 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 FSTL1Q12841 308 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 GRM1Q13255 1194 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 SLFN13Q68D06 897 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 SYNE3Q6ZMZ3 975 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 ERO1BQ86YB8 467 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 FANCBQ8NB91 859 aa22.54■■□□□ 1.2
SRRM3-205ENST00000612155 PDHBP11177 359 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 HS1BP3Q53T59 392 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 SAMD1Q6SPF0 538 aaPredicted RBP22.53■■□□□ 1.2
SRRM3-205ENST00000612155 GPCPD1Q9NPB8 672 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 EMILIN3Q9NT22 766 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 TMEM88BA6NKF7 163 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 YEATS4O95619 227 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.2
SRRM3-205ENST00000612155 ANO1Q5XXA6 986 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 ADALQ6DHV7 355 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 ZSCAN30Q86W11 494 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 AS3MTQ9HBK9 375 aa22.53■■□□□ 1.2
SRRM3-205ENST00000612155 BAZ2BQ9UIF8 2168 aaKnown RBP22.53■■□□□ 1.2
SRRM3-205ENST00000612155 PLEKHA8P1O95397 391 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 BACE1P56817 501 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 STK38Q15208 465 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 ANO6Q4KMQ2 910 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 TTBK2Q6IQ55 1244 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 FMR1NBQ8N0W7 255 aaPredicted RBP22.52■■□□□ 1.2
SRRM3-205ENST00000612155 SHISA4Q96DD7 197 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 WDR18Q9BV38 432 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 VCPKMTQ9H867 229 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 GINM1Q9NU53 330 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 CEP350Q5VT06 3117 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 SPTLC2O15270 562 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 ADCY5O95622 1261 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 ZNF157P51786 506 aaPredicted RBP22.52■■□□□ 1.2
SRRM3-205ENST00000612155 FAM160A1Q05DH4 1040 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 PPATQ06203 517 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 CCDC96Q2M329 555 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 AXDND1Q5T1B0 1012 aaPredicted RBP22.52■■□□□ 1.2
SRRM3-205ENST00000612155 PIBF1Q8WXW3 757 aa22.52■■□□□ 1.2
SRRM3-205ENST00000612155 MAD2L2Q9UI95 211 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms