RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SMCHD1A6NHR9 2005 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 GOLGA8HP0CJ92 632 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 KIF5BP33176 963 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 ECE1P42892 770 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 ICA1Q05084 483 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 GRM1Q13255 1194 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 SLC35G1Q2M3R5 365 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 PRAMEF18Q5VWM3 479 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 FAM173BQ6P4H8 233 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 APOBEC3FQ8IUX4 373 aaKnown RBP9.38□□□□□ -0.91
TARDBP-213ENST00000611963 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 CPVLQ9H3G5 476 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-213ENST00000611963 MAD2L2Q9UI95 211 aa9.38□□□□□ -0.91
TARDBP-213ENST00000611963 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 FAM155AB1AL88 458 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 DEXIO95424 95 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 PDHBP11177 359 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 EEF2P13639 858 aaKnown RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 HUNKP57058 714 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 AKAP17AQ02040 695 aaKnown RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 NBPF12Q5TAG4 269 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.911e-9■□□□□ 11
TARDBP-213ENST00000611963 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 CABP5Q9NP86 173 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 ZBTB21Q9ULJ3 1066 aa9.37□□□□□ -0.91
TARDBP-213ENST00000611963 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-213ENST00000611963 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 SNPHO15079 494 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 RAD21O60216 631 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 TBC1D12O60347 775 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 HSPA8P11142 646 aaKnown RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 MAP2K2P36507 400 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 GNAQP50148 359 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 MAP3K10Q02779 954 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 PKN1Q16512 942 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 CCDC96Q2M329 555 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 KRT40Q6A162 431 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 MOB2Q70IA6 237 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 CCDC84Q86UT8 332 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 C2orf69Q8N8R5 385 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 WASF1Q92558 559 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 SHISA4Q96DD7 197 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 KANSL2Q9H9L4 492 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 NYAP2Q9P242 653 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 ISY1Q9ULR0 285 aaKnown RBP9.36□□□□□ -0.91
TARDBP-213ENST00000611963 KCNJ14Q9UNX9 436 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 CNPY2Q9Y2B0 182 aa9.36□□□□□ -0.91
TARDBP-213ENST00000611963 PHIPQ8WWQ0 1821 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 PAPPA2Q9BXP8 1791 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 SSC5DA1L4H1 1573 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 PHF20L1A8MW92 1017 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 KIF28PB7ZC32 967 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 KLRF2D3W0D1 207 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 FIBPO43427 364 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 CYTH3O43739 400 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 SNHG28P0DPA3 235 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
TARDBP-213ENST00000611963 CAP2P40123 477 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 CTCFP49711 727 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-213ENST00000611963 LBX1P52954 281 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 TRIM29Q14134 588 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 RGMBQ6NW40 437 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 UBA5Q9GZZ9 404 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
TARDBP-213ENST00000611963 FZD1Q9UP38 647 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
TARDBP-213ENST00000611963 A0A1W2PRG0 241 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 PRPF40AO75400 957 aaKnown RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 SCG2P13521 617 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 INPP5BP32019 993 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 KIF23Q02241 960 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ZNF543Q08ER8 600 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 NOGQ13253 232 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms