RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 BPIFA3Q9BQP9 254 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 LZTFL1Q9NQ48 299 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 CHCHD3Q9NX63 227 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 ADGRA1Q86SQ6 560 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 UBXN4Q92575 508 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 CSRNP2Q9H175 543 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC87Q9NVE4 849 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 IKBKBO14920 756 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 TEX33O43247 280 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 PPP6R2O75170 966 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 SYCP1Q15431 976 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 THOC1Q96FV9 657 aaKnown RBP12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC34Q96HJ3 373 aa12.07□□□□□ -0.48
PCDHGC3-202ENST00000611950 ERICH2A1L162 156 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 SMAPO00193 183 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CUTAO60888 179 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 MMP1P03956 469 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 LIFRP42702 1097 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 TRAF1Q13077 416 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 ITPK1Q13572 414 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 TRIM65Q6PJ69 517 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 REXO1L1PQ8IX06 675 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 SMARCE1Q969G3 411 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 MED15Q96RN5 788 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 A0A087X0B3 334 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CAPN15O75808 1086 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 MYBL2P10244 700 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 PSMD2Q13200 908 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC24Q8N4L8 307 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 MAPK8IP1Q9UQF2 711 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 SOWAHDA6NJG2 315 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 NTSR2O95665 410 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CYP7A1P22680 504 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CDC25AP30304 524 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 GYG1P46976 350 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 FAM53CQ9NYF3 392 aa12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
PCDHGC3-202ENST00000611950 CBFA2T2O43439 604 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 PLEKHA8P1O95397 391 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 MMP10P09238 476 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 ZNF174Q15697 407 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 EEF2KMTQ96G04 330 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 BLZF1Q9H2G9 400 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 L2HGDHQ9H9P8 463 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 ZCCHC17Q9NP64 241 aaKnown RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 NMT2O60551 498 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCT6AP40227 531 aaKnown RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 TBC1D25Q3MII6 688 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC26Q8TAB7 109 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 CPSF2Q9P2I0 782 aaKnown RBP12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
PCDHGC3-202ENST00000611950 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 KIF2AO00139 706 aaPredicted RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 CHRNDQ07001 517 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 RASA3Q14644 834 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 TMEM139Q8IV31 216 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 LZTS2Q9BRK4 669 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 TNKSO95271 1327 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 IFNAR1P17181 557 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 AKAP17AQ02040 695 aaKnown RBP12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 CCDC93Q567U6 631 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 TC2NQ8N9U0 490 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
PCDHGC3-202ENST00000611950 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms