RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CLEC10AQ8IUN9 316 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 EIF6P56537 245 aaKnown RBP18.06■□□□□ 0.48
RTN1-209ENST00000611068 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 KRT40Q6A162 431 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 PODNQ7Z5L7 613 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 FAN1Q9Y2M0 1017 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 ADAMTSL1Q8N6G6 1762 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 HNRNPH1P31943 449 aaKnown RBP18.05■□□□□ 0.48
RTN1-209ENST00000611068 CRKP46108 304 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 CDK8P49336 464 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 CDC42EP5Q6NZY7 148 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 GAKO14976 1311 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 SMC2O95347 1197 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 FGRP09769 529 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 ZRSR1Q15695 479 aaKnown RBP18.05■□□□□ 0.48
RTN1-209ENST00000611068 APOBEC3HQ6NTF7 200 aaKnown RBP18.05■□□□□ 0.48
RTN1-209ENST00000611068 TEKT1Q969V4 418 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 ZBTB12Q9Y330 459 aaPredicted RBP18.05■□□□□ 0.48
RTN1-209ENST00000611068 SH3BP1Q9Y3L3 701 aa18.05■□□□□ 0.48
RTN1-209ENST00000611068 V9GY48 417 aaPredicted RBP18.05■□□□□ 0.48
RTN1-209ENST00000611068 ORC4O43929 436 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 WDHD1O75717 1129 aaPredicted RBP18.04■□□□□ 0.48
RTN1-209ENST00000611068 CDKL5O76039 1030 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 MCM6Q14566 821 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 FBXW10Q5XX13 1052 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 TMTC2Q8N394 836 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 PGBD1Q96JS3 809 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 A0A087WUV0 522 aaPredicted RBP18.04■□□□□ 0.48
RTN1-209ENST00000611068 VEGFAP15692 232 aaPredicted RBP18.04■□□□□ 0.48
RTN1-209ENST00000611068 RASA1P20936 1047 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 DACT2Q5SW24 774 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 RCSD1Q6JBY9 416 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 ARMCX5Q6P1M9 558 aa18.04■□□□□ 0.48
RTN1-209ENST00000611068 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
RTN1-209ENST00000611068 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
RTN1-209ENST00000611068 MAP2K7O14733 419 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 TPM1P09493 284 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 LIG3P49916 1009 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 TROAPQ12815 778 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 ISM2Q6H9L7 571 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 TRIM65Q6PJ69 517 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
RTN1-209ENST00000611068 DDX19AQ9NUU7 478 aaKnown RBP18.03■□□□□ 0.48
RTN1-209ENST00000611068 SCN9AQ15858 1988 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 MAST2Q6P0Q8 1798 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 FMNL1O95466 1100 aaPredicted RBP18.03■□□□□ 0.48
RTN1-209ENST00000611068 GOLGA8HP0CJ92 632 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 LARGE2Q8N3Y3 721 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 GPR161Q8N6U8 529 aaKnown RBP18.03■□□□□ 0.48
RTN1-209ENST00000611068 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 RGPD3A6NKT7 1758 aaPredicted RBP18.03■□□□□ 0.48
RTN1-209ENST00000611068 RGPD4Q7Z3J3 1758 aa18.03■□□□□ 0.48
RTN1-209ENST00000611068 PLCG2P16885 1265 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 STAG2Q8N3U4 1231 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 PHLPP2Q6ZVD8 1323 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 IFNAR1P17181 557 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 SHROOM1Q2M3G4 852 aaPredicted RBP18.02■□□□□ 0.48
RTN1-209ENST00000611068 ZSCAN29Q8IWY8 852 aaPredicted RBP18.02■□□□□ 0.48
RTN1-209ENST00000611068 TRIM22Q8IYM9 498 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 SCAND2PQ9GZW5 306 aaPredicted RBP18.02■□□□□ 0.48
RTN1-209ENST00000611068 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
RTN1-209ENST00000611068 BTBD18B2RXH4 712 aa18.02■□□□□ 0.47
RTN1-209ENST00000611068 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.47
RTN1-209ENST00000611068 TRIM29Q14134 588 aa18.02■□□□□ 0.47
RTN1-209ENST00000611068 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.47
RTN1-209ENST00000611068 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.47
RTN1-209ENST00000611068 PHACTR2O75167 634 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 ERLIN2O94905 339 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 INHBEP58166 350 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 STRIP1Q5VSL9 837 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 SRBD1Q8N5C6 995 aaKnown RBP18.01■□□□□ 0.47
RTN1-209ENST00000611068 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 ME1P48163 572 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 GSDMDP57764 484 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 NR5A1Q13285 461 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 TTC19Q6DKK2 380 aaPredicted RBP18.01■□□□□ 0.47
RTN1-209ENST00000611068 OXER1Q8TDS5 423 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
RTN1-209ENST00000611068 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
RTN1-209ENST00000611068 FAM177A1Q8N128 213 aaPredicted RBP18■□□□□ 0.47
RTN1-209ENST00000611068 PNMA1Q8ND90 353 aa18■□□□□ 0.47
RTN1-209ENST00000611068 JPH2Q9BR39 696 aaPredicted RBP18■□□□□ 0.47
RTN1-209ENST00000611068 OSBPL5Q9H0X9 879 aaPredicted RBP18■□□□□ 0.47
RTN1-209ENST00000611068 SLC24A3Q9HC58 644 aa18■□□□□ 0.47
RTN1-209ENST00000611068 CFAP45Q9UL16 551 aa18■□□□□ 0.47
RTN1-209ENST00000611068 BECN2A8MW95 431 aa18■□□□□ 0.47
RTN1-209ENST00000611068 RAD21O60216 631 aa18■□□□□ 0.47
RTN1-209ENST00000611068 MARCKSP29966 332 aaPredicted RBP18■□□□□ 0.47
RTN1-209ENST00000611068 ATP2B2Q01814 1243 aa18■□□□□ 0.47
RTN1-209ENST00000611068 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
RTN1-209ENST00000611068 WWC2Q6AWC2 1192 aa18■□□□□ 0.47
RTN1-209ENST00000611068 CNNM3Q8NE01 707 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms