RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.27
HDDC2-209ENST00000609477 PLXNB2O15031 1838 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 EPB41L2O43491 1005 aaKnown RBP16.76■□□□□ 0.27
HDDC2-209ENST00000609477 PEX10O60683 326 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 HOXC6P09630 235 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 ERCC3P19447 782 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 GRB14Q14449 540 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
HDDC2-209ENST00000609477 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
HDDC2-209ENST00000609477 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 TMEM106CQ9BVX2 250 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 KAT14Q9H8E8 782 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
HDDC2-209ENST00000609477 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 TNKSO95271 1327 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 ERICH2A1L162 156 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 PDHBP11177 359 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 RGS19P49795 217 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-209ENST00000609477 WDR78Q5VTH9 848 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-209ENST00000609477 PNMA1Q8ND90 353 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 APBA2Q99767 749 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
HDDC2-209ENST00000609477 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
HDDC2-209ENST00000609477 SLC27A2O14975 620 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 CAPN15O75808 1086 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 REC8O95072 547 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 HMGCRP04035 888 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 FCER1AP12319 257 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 SEC23AQ15436 765 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
HDDC2-209ENST00000609477 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 KCTD1Q719H9 257 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDDC2-209ENST00000609477 NCAPG2Q86XI2 1143 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 BIN2Q9UBW5 565 aaPredicted RBP16.74■□□□□ 0.27
HDDC2-209ENST00000609477 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 CENPFP49454 3210 aa16.74■□□□□ 0.27
HDDC2-209ENST00000609477 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
HDDC2-209ENST00000609477 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
HDDC2-209ENST00000609477 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
HDDC2-209ENST00000609477 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
HDDC2-209ENST00000609477 TMTC2Q8N394 836 aa16.73■□□□□ 0.27
HDDC2-209ENST00000609477 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
HDDC2-209ENST00000609477 PRR12Q9ULL5 1215 aa16.73■□□□□ 0.27
HDDC2-209ENST00000609477 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
HDDC2-209ENST00000609477 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
HDDC2-209ENST00000609477 CYP2B6P20813 491 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 MCM5P33992 734 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 KRT32Q14532 448 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 KCTD2Q14681 263 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
HDDC2-209ENST00000609477 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
HDDC2-209ENST00000609477 DIS3Q9Y2L1 958 aaKnown RBP16.72■□□□□ 0.27
HDDC2-209ENST00000609477 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
HDDC2-209ENST00000609477 INHAP05111 366 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 ELNP15502 786 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 ADORA2AP29274 412 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 OLFML2BQ68BL8 750 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
HDDC2-209ENST00000609477 RANBP17Q9H2T7 1088 aaKnown RBP16.71■□□□□ 0.27
HDDC2-209ENST00000609477 GJB1P08034 283 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 WTAPQ15007 396 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 TRIB2Q92519 343 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 MMP19Q99542 508 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 MAF1Q9H063 256 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 RAVER2Q9HCJ3 691 aaKnown RBP16.7■□□□□ 0.26
HDDC2-209ENST00000609477 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 WDR19Q8NEZ3 1342 aa16.7■□□□□ 0.26
HDDC2-209ENST00000609477 ZNFX1Q9P2E3 1918 aaKnown RBP16.69■□□□□ 0.26
HDDC2-209ENST00000609477 ICAM1P05362 532 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
HDDC2-209ENST00000609477 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
HDDC2-209ENST00000609477 CCL5P13501 91 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 LIFRP42702 1097 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 SOX10P56693 466 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 MAP3K21Q5TCX8 1036 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 KCNB2Q92953 911 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 MAP3K14Q99558 947 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
HDDC2-209ENST00000609477 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 RIPK3Q9Y572 518 aa16.69■□□□□ 0.26
HDDC2-209ENST00000609477 ZNF536O15090 1300 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms