RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.27
HDDC2-206ENST00000608461 PLXNB2O15031 1838 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 EPB41L2O43491 1005 aaKnown RBP16.76■□□□□ 0.27
HDDC2-206ENST00000608461 PEX10O60683 326 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 HOXC6P09630 235 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 ERCC3P19447 782 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 GRB14Q14449 540 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
HDDC2-206ENST00000608461 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
HDDC2-206ENST00000608461 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 TMEM106CQ9BVX2 250 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 KAT14Q9H8E8 782 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
HDDC2-206ENST00000608461 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 TNKSO95271 1327 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 ERICH2A1L162 156 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 PDHBP11177 359 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 RGS19P49795 217 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-206ENST00000608461 WDR78Q5VTH9 848 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-206ENST00000608461 PNMA1Q8ND90 353 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 APBA2Q99767 749 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
HDDC2-206ENST00000608461 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
HDDC2-206ENST00000608461 SLC27A2O14975 620 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 CAPN15O75808 1086 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 REC8O95072 547 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 HMGCRP04035 888 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 FCER1AP12319 257 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 SEC23AQ15436 765 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
HDDC2-206ENST00000608461 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 KCTD1Q719H9 257 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
HDDC2-206ENST00000608461 NCAPG2Q86XI2 1143 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 BIN2Q9UBW5 565 aaPredicted RBP16.74■□□□□ 0.27
HDDC2-206ENST00000608461 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 CENPFP49454 3210 aa16.74■□□□□ 0.27
HDDC2-206ENST00000608461 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
HDDC2-206ENST00000608461 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
HDDC2-206ENST00000608461 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
HDDC2-206ENST00000608461 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
HDDC2-206ENST00000608461 TMTC2Q8N394 836 aa16.73■□□□□ 0.27
HDDC2-206ENST00000608461 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
HDDC2-206ENST00000608461 PRR12Q9ULL5 1215 aa16.73■□□□□ 0.27
HDDC2-206ENST00000608461 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
HDDC2-206ENST00000608461 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
HDDC2-206ENST00000608461 CYP2B6P20813 491 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 MCM5P33992 734 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 KRT32Q14532 448 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 KCTD2Q14681 263 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
HDDC2-206ENST00000608461 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
HDDC2-206ENST00000608461 DIS3Q9Y2L1 958 aaKnown RBP16.72■□□□□ 0.27
HDDC2-206ENST00000608461 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
HDDC2-206ENST00000608461 INHAP05111 366 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 ELNP15502 786 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 ADORA2AP29274 412 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 OLFML2BQ68BL8 750 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
HDDC2-206ENST00000608461 RANBP17Q9H2T7 1088 aaKnown RBP16.71■□□□□ 0.27
HDDC2-206ENST00000608461 GJB1P08034 283 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 WTAPQ15007 396 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 TRIB2Q92519 343 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 MMP19Q99542 508 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 MAF1Q9H063 256 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 RAVER2Q9HCJ3 691 aaKnown RBP16.7■□□□□ 0.26
HDDC2-206ENST00000608461 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 WDR19Q8NEZ3 1342 aa16.7■□□□□ 0.26
HDDC2-206ENST00000608461 ZNFX1Q9P2E3 1918 aaKnown RBP16.69■□□□□ 0.26
HDDC2-206ENST00000608461 ICAM1P05362 532 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
HDDC2-206ENST00000608461 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
HDDC2-206ENST00000608461 CCL5P13501 91 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 LIFRP42702 1097 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 SOX10P56693 466 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 MAP3K21Q5TCX8 1036 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 MFSD14CQ5VZR4 134 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 KCNB2Q92953 911 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 MAP3K14Q99558 947 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
HDDC2-206ENST00000608461 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 RIPK3Q9Y572 518 aa16.69■□□□□ 0.26
HDDC2-206ENST00000608461 ZNF536O15090 1300 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms