RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CCDC63Q8NA47 563 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 LLPHQ9BRT6 129 aaKnown RBP13.99□□□□□ -0.17
CTCFL-218ENST00000608440 WWC3Q9ULE0 1092 aa13.99□□□□□ -0.17
CTCFL-218ENST00000608440 ABCC6O95255 1503 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 YEATS4O95619 227 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 GYPCP04921 128 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 TMOD1P28289 359 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 STX17P56962 302 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 DBN1Q16643 649 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 MAF1Q9H063 256 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 LTBP4Q8N2S1 1624 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 A0A1B0GTH6 734 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 DNAJC8O75937 253 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-218ENST00000608440 CUL3Q13618 768 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 HSP90AB4PQ58FF6 505 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 KLHL10Q6JEL2 608 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 SPICE1Q8N0Z3 855 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-218ENST00000608440 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-218ENST00000608440 BOLA2Q9H3K6 86 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
CTCFL-218ENST00000608440 CRYBG1Q9Y4K1 1723 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-218ENST00000608440 EVI5O60447 810 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 ATP6V1G1O75348 118 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 EPHB4P54760 987 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 POLE2P56282 527 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 CCDC122Q5T0U0 273 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 ANO1Q5XXA6 986 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 NUGGCQ68CJ6 796 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 SHC4Q6S5L8 630 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 CRELD2Q6UXH1 353 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-218ENST00000608440 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-218ENST00000608440 RPGRIP1Q96KN7 1286 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 MED15Q96RN5 788 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 CHP1Q99653 195 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 MAP3K5Q99683 1374 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 N4BP3O15049 544 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 TUBP50607 506 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 BYSLQ13895 437 aaKnown RBP13.97□□□□□ -0.17
CTCFL-218ENST00000608440 MFSD4BQ5TF39 518 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 TMTC1Q8IUR5 882 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 NUP88Q99567 741 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-218ENST00000608440 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 HMG20BQ9P0W2 317 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 CRB1P82279 1406 aa13.97□□□□□ -0.17
CTCFL-218ENST00000608440 GNAT3A8MTJ3 354 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 PHF20L1A8MW92 1017 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 M0R2C6 588 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 PSMD14O00487 310 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 AACSQ86V21 672 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 CNGA4Q8IV77 575 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 CCT6BQ92526 530 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 UBE2OQ9C0C9 1292 aaKnown RBP13.96□□□□□ -0.17
CTCFL-218ENST00000608440 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 DNAAF2Q9NVR5 837 aaKnown RBP13.96□□□□□ -0.17
CTCFL-218ENST00000608440 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.17
CTCFL-218ENST00000608440 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 ZMYM6O95789 1325 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 LRRD1A4D1F6 860 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 GUCY2FP51841 1108 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 KRT32Q14532 448 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 LACTB2Q53H82 288 aaPredicted RBP13.96□□□□□ -0.18
CTCFL-218ENST00000608440 STK11IPQ8N1F8 1099 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 GPATCH3Q96I76 525 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 PSMB7Q99436 277 aa13.96□□□□□ -0.18
CTCFL-218ENST00000608440 MMTAG2Q9BU76 263 aaKnown RBP13.96□□□□□ -0.18
CTCFL-218ENST00000608440 REXO2Q9Y3B8 237 aaKnown RBP13.96□□□□□ -0.18
CTCFL-218ENST00000608440 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 KIF28PB7ZC32 967 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 COBLO75128 1261 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CHGBP05060 677 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 FAM153BP0C7A2 387 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CCT6AP40227 531 aaKnown RBP13.95□□□□□ -0.18
CTCFL-218ENST00000608440 SLMAPQ14BN4 828 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 FAM153CQ494X1 144 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 AMOTQ4VCS5 1084 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 ACBD5Q5T8D3 534 aaPredicted RBP13.95□□□□□ -0.18
CTCFL-218ENST00000608440 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CCDC102BQ68D86 513 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 CPLX4Q7Z7G2 160 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 EDC3Q96F86 508 aaKnown RBP13.95□□□□□ -0.18
CTCFL-218ENST00000608440 BICD1Q96G01 975 aa13.95□□□□□ -0.18
CTCFL-218ENST00000608440 PCMTD2Q9NV79 361 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms