RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 PSMA5P28066 241 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 GCKRQ14397 625 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 LINC00301Q8NCQ3 95 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 AGAP11Q8TF27 550 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 MAP4K1Q92918 833 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.28
CTCFL-217ENST00000608425 ZIM3Q96PE6 472 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 OSBPL9Q96SU4 736 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-217ENST00000608425 OCEL1Q9H607 264 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 PANK4Q9NVE7 773 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 TNS2Q63HR2 1409 aa13.27□□□□□ -0.28
CTCFL-217ENST00000608425 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 MYL6BP14649 208 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 ROR2Q01974 943 aaKnown RBP13.27□□□□□ -0.29
CTCFL-217ENST00000608425 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-217ENST00000608425 XRCC4Q13426 336 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
CTCFL-217ENST00000608425 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 ALS2CR12Q96Q35 445 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 UBE2OQ9C0C9 1292 aaKnown RBP13.27□□□□□ -0.29
CTCFL-217ENST00000608425 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-217ENST00000608425 NFE2L3Q9Y4A8 694 aa13.27□□□□□ -0.29
CTCFL-217ENST00000608425 A6NHS1 94 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TPD52L2O43399 206 aaKnown RBP13.26□□□□□ -0.29
CTCFL-217ENST00000608425 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 FAM107AO95990 144 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 ANKRD1Q15327 319 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 AKNAD1Q5T1N1 836 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TRAPPC11Q7Z392 1133 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 SPICE1Q8N0Z3 855 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 C8orf76Q96K31 380 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 PHACTR1Q9C0D0 580 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 FAM184BQ9ULE4 1060 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 CDC25AP30304 524 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-217ENST00000608425 PPARAQ07869 468 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 BLMHQ13867 455 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TUBB2AQ13885 445 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
CTCFL-217ENST00000608425 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TUBB2BQ9BVA1 445 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 SLC5A4Q9NY91 659 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 RNF225M0QZC1 329 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-217ENST00000608425 OPA1O60313 960 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 IL2RBP14784 551 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 BYSLQ13895 437 aaKnown RBP13.26□□□□□ -0.29
CTCFL-217ENST00000608425 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TRIM4Q9C037 500 aa13.26□□□□□ -0.29
CTCFL-217ENST00000608425 TJP1Q07157 1748 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 M0R2C6 588 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 FERP16591 822 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 CASP14P31944 242 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 MATR3P43243 847 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 ERVK-24P63145 666 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 NUGGCQ68CJ6 796 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 MED15Q96RN5 788 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 MYD88Q99836 296 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 PCMTD2Q9NV79 361 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 GCLCP48506 637 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 FXR1P51114 621 aaKnown RBP eCLIP13.25□□□□□ -0.292e-8■□□□□ 9.7
CTCFL-217ENST00000608425 RBM12BQ8IXT5 1001 aaKnown RBP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 PRCCQ92733 491 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 HVCN1Q96D96 273 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 MMTAG2Q9BU76 263 aaKnown RBP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 OSBPL1AQ9BXW6 950 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 DNAAF2Q9NVR5 837 aaKnown RBP13.25□□□□□ -0.29
CTCFL-217ENST00000608425 ZFATQ9P243 1243 aa13.25□□□□□ -0.29
CTCFL-217ENST00000608425 A0A1W2PQ27 194 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 A0A1W2PQ64 194 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 A0A1W2PQD8 194 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 DRP2Q13474 957 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 LRRC1Q9BTT6 524 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms