RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, human

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1A1-209	ENST00000606299	BSDC1	Q9NW68	430 aa	Predicted RBP	11.76	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	DLEC1	Q9Y238	1755 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SPDYE3	A6NKU9	549 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	POLRMT	O00411	1230 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ARID4A	P29374	1257 aa	Predicted RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ANAPC15	P60006	121 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RPS8	P62241	208 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	DGKZ	Q13574	1117 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	EZH2	Q15910	746 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MCMDC2	Q4G0Z9	681 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CCDC129	Q6ZRS4	1044 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RPGR	Q92834	1020 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	BHMT	Q93088	406 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	TRIM11	Q96F44	468 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SLK	Q9H2G2	1235 aa	Predicted RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZMIZ1	Q9ULJ6	1067 aa		11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RBM8A	Q9Y5S9	174 aa	Known RBP	11.75	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	LTBP1	Q14766	1721 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	LAMB1	P07942	1786 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299		K7ELQ4	463 aa	Predicted RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RNF113A	O15541	343 aa	Known RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	PRPF40B	Q6NWY9	871 aa	Known RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	FLAD1	Q8NFF5	587 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SEC62	Q99442	399 aa	Known RBP	11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	C11orf16	Q9NQ32	467 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	HELLS	Q9NRZ9	838 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	KLK14	Q9P0G3	267 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MINPP1	Q9UNW1	487 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	PNPLA7	Q6ZV29	1317 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	TCHH	Q07283	1943 aa		11.74	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	INPP5B	P32019	993 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	NEK4	P51957	841 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SF3B2	Q13435	895 aa	Known RBP	11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	GRAP	Q13588	217 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	TTF1	Q15361	905 aa	Predicted RBP	11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZMYM1	Q5SVZ6	1142 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MSL1	Q68DK7	614 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SLX4	Q8IY92	1834 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	GRAPL	Q8TC17	118 aa	Predicted RBP	11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	5e-10	■□□□□ 8.6
CSNK1A1-209	ENST00000606299	ANKRD2	Q9GZV1	360 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	PIH1D3	Q9NQM4	214 aa	Known RBP	11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	STARD13	Q9Y3M8	1113 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SNX14	Q9Y5W7	946 aa		11.73	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MAST3	O60307	1309 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299		M0R082	166 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299		M0R2C6	588 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ATG7	O95352	703 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CYP2E1	P05181	493 aa	Predicted RBP	11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	HSP90AA1	P07900	732 aa	Known RBP	11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	IDH3A	P50213	366 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ARSD	P51689	593 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CCIN	Q13939	588 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	UBE4A	Q14139	1066 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SUZ12	Q15022	739 aa	Known RBP	11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	TICAM2	Q86XR7	235 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	NLGN1	Q8N2Q7	840 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SPATA5	Q8NB90	893 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZNF417	Q8TAU3	575 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MAP4K1	Q92918	833 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RBM17	Q96I25	401 aa	Known RBP	11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	PNMA5	Q96PV4	448 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	PLVAP	Q9BX97	442 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	GSX2	Q9BZM3	304 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	STK32B	Q9NY57	414 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	HMG20B	Q9P0W2	317 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MYH8	P13535	1937 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	NAV1	Q8NEY1	1877 aa		11.72	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	MYH6	P13533	1939 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	IDH1	O75874	414 aa	Known RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ALB	P02768	609 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZFY	P08048	801 aa	Predicted RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	SPATA31C1	P0DKV0	1188 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	GYG1	P46976	350 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	RASGRF1	Q13972	1273 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	C11orf91	Q3C1V1	193 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CREB3L3	Q68CJ9	461 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	ZSCAN25	Q6NSZ9	544 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	VPS37D	Q86XT2	251 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CCDC97	Q96F63	343 aa	Predicted RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	CAMKK2	Q96RR4	588 aa		11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	UPF3B	Q9BZI7	483 aa	Known RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	UBE2O	Q9C0C9	1292 aa	Known RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	GNL3L	Q9NVN8	582 aa	Known RBP	11.71	□□□□□ -0.53
CSNK1A1-209	ENST00000606299	COL1A1	P02452	1464 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	ECM29	Q5VYK3	1845 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	WTIP	A6NIX2	430 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	SLC27A2	O14975	620 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	MMP10	P09238	476 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	ZKSCAN1	P17029	563 aa	Predicted RBP	11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	BAG6	P46379	1132 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	NECTIN1	Q15223	517 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	OCLN	Q16625	522 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	CAVIN4	Q5BKX8	364 aa		11.7	□□□□□ -0.54
CSNK1A1-209	ENST00000606299	NOL8	Q76FK4	1167 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms