RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CWC15Q9P013 229 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 EGFL7Q9UHF1 273 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 GTF2IRD1Q9UHL9 959 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 A2MP01023 1474 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 TROQ12816 1431 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CARMIL2Q6F5E8 1435 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 MYOM1P52179 1685 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 ABCC11Q96J66 1382 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 NEURL4Q96JN8 1562 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ELP1O95163 1332 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC171Q6TFL3 1326 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ZNF644Q9H582 1327 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TOPBP1Q92547 1522 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ICMTO60725 284 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 LEFTY1O75610 366 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TPM1P09493 284 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TNNT1P13805 278 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 HSP90B1P14625 803 aaKnown RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TNNT3P45378 269 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 GTF2A1P52655 376 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ANAPC15P60006 121 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 UBE2HP62256 183 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 LMOD3Q0VAK6 560 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 GPS2Q13227 327 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 DHX8Q14562 1220 aaKnown RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 MLANAQ16655 118 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 INTS3Q68E01 1043 aaKnown RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 MPZL3Q6UWV2 235 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TCP11L2Q8N4U5 519 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 MNS1Q8NEH6 495 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 FBXO18Q8NFZ0 1043 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ASB11Q8WXH4 323 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC74AQ96AQ1 378 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 WDR89Q96FK6 387 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 TOX2Q96NM4 488 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CEP89Q96ST8 783 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 DUSP23Q9BVJ7 150 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 L2HGDHQ9H9P8 463 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CBX8Q9HC52 389 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ABCB6Q9NP58 842 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 KRT82Q9NSB4 513 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 NLRP2Q9NX02 1062 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 DONSONQ9NYP3 566 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 CFDP1Q9UEE9 299 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 ADAMTS6Q9UKP5 1117 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 PYCARDQ9ULZ3 195 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 MYO5CQ9NQX4 1742 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 MED14O60244 1454 aa4.79□□□□□ -1.64
HMGB1P50-201ENST00000605814 RTL1A6NKG5 1358 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 ADGRB2O60241 1585 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 PTPRCP08575 1304 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 CDK13Q14004 1512 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 KDM5AP29375 1690 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 PPRC1Q5VV67 1664 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 A0A1B0GUL7 405 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 GNAT3A8MTJ3 354 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 EIF1AYO14602 144 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 ZRANB2O95218 330 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 SLU7O95391 586 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 TRIM27P14373 513 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 MAGEA9P43362 315 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 KCNJ6P48051 423 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 FCGRTP55899 365 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIF4BQ2VIQ3 1234 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 FBLN7Q53RD9 439 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 PRPF40BQ6NWY9 871 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 RNF214Q8ND24 703 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 GOLGA5Q8TBA6 731 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 EXOC4Q96A65 974 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 PPP1R16BQ96T49 567 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 TACO1Q9BSH4 297 aaKnown RBP4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 DNAJC25Q9H1X3 360 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 DCTPP1Q9H773 170 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 MED4Q9NPJ6 270 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 DISC1Q9NRI5 854 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 RSPH14Q9UHP6 348 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 TNNQ9UQP3 1299 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 CEP83Q9Y592 693 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 FHOD1Q9Y613 1164 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 C9orf84Q5VXU9 1444 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 SBNO2Q9Y2G9 1366 aa4.78□□□□□ -1.64
HMGB1P50-201ENST00000605814 RAD54L2Q9Y4B4 1467 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 USP32Q8NFA0 1604 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 MYO1CO00159 1063 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZNF862O60290 1169 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 CPP00450 1065 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 APPP05067 770 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 IVLP07476 585 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC172P0C7W6 258 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 RAP1GAPP47736 663 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 SERPINB4P48594 390 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 OXCT1P55809 520 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms