RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 RPS6KA5O75582 802 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 RPSAP08865 295 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 MIEF2Q96C03 454 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 ZNF396Q96N95 335 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 ANGEL1Q9UNK9 670 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 CPP00450 1065 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 SPECC1Q5M775 1068 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 FANCLQ9NW38 375 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 XDHP47989 1333 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 ZMYND10O75800 440 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
PPFIA3-206ENST00000602655 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 ZEB2O60315 1214 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 EXOSC10Q01780 885 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 CUTAO60888 179 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 GCKP35557 465 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 E2F5Q15329 346 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
PPFIA3-206ENST00000602655 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 FMNL3Q8IVF7 1028 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 GOLGA6CA6NDK9 693 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 GOLGA6DP0CG33 693 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 GBP2P32456 591 aaPredicted RBP17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 FBXO33Q7Z6M2 555 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 GOLGA6AQ9NYA3 693 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 BTDP43251 543 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
PPFIA3-206ENST00000602655 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 GNGT1P63211 74 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 SSR1P43307 286 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 TNKSO95271 1327 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 H0YIN7 160 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 NDUFA8P51970 172 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 RESTQ13127 1097 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 FKBP15Q5T1M5 1219 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 APOA5Q6Q788 366 aa17.23■□□□□ 0.35
PPFIA3-206ENST00000602655 RAD17O75943 681 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 MAP9Q49MG5 647 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CHUKO15111 745 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 PFKFB2O60825 505 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 ATP2C2O75185 946 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CCDC175P0C221 793 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 PLCD1P51178 756 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 TFAP4Q01664 338 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 STIM1Q13586 685 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 KCNJ6P48051 423 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 MTF1Q14872 753 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 AOC3Q16853 763 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CEP85LQ5SZL2 805 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CPSF2Q9P2I0 782 aaKnown RBP17.22■□□□□ 0.35
PPFIA3-206ENST00000602655 CTAGE9A4FU28 777 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 TRIM29Q14134 588 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 ATRNO75882 1429 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 FDPSP14324 419 aaKnown RBP17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 AP1ARQ63HQ0 302 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 ESR2Q92731 530 aa17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-206ENST00000602655 KCNB2Q92953 911 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 CAPS2Q9BXY5 557 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 ZNF202O95125 648 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 IRAK1P51617 712 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 RTN1Q16799 776 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 PCDHA7Q9UN72 937 aa17.2■□□□□ 0.34
PPFIA3-206ENST00000602655 GGCXP38435 758 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms