RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-238ENST00000602015 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.22
FARP1-238ENST00000602015 TNFRSF10DQ9UBN6 386 aa7.4□□□□□ -1.22
FARP1-238ENST00000602015 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
FARP1-238ENST00000602015 UBOX5O94941 541 aa7.39□□□□□ -1.23
FARP1-238ENST00000602015 TMEM62Q0P6H9 643 aa7.39□□□□□ -1.23
FARP1-238ENST00000602015 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
FARP1-238ENST00000602015 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
FARP1-238ENST00000602015 MBD1Q9UIS9 605 aaPredicted RBP7.39□□□□□ -1.23
FARP1-238ENST00000602015 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
FARP1-238ENST00000602015 N4BP3O15049 544 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 SASH1O94885 1247 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 GARTP22102 1010 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 ARL4AP40617 200 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
FARP1-238ENST00000602015 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 GALNT18Q6P9A2 607 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 KCNQ5Q9NR82 932 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
FARP1-238ENST00000602015 ARAP1Q96P48 1450 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 TMEM82A0PJX8 343 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 WTIPA6NIX2 430 aaPredicted RBP7.37□□□□□ -1.23
FARP1-238ENST00000602015 SIGLEC6O43699 453 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 MPOP05164 745 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 SYPP08247 313 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 GALK1P51570 392 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 RTP1P59025 263 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 LAPTM5Q13571 262 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 SSPNQ14714 243 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 HHIPL1Q96JK4 782 aa7.37□□□□□ -1.23
FARP1-238ENST00000602015 FCRL2Q96LA5 508 aaPredicted RBP7.37□□□□□ -1.23
FARP1-238ENST00000602015 CEP164Q9UPV0 1460 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 FOXD2O60548 495 aaPredicted RBP7.36□□□□□ -1.23
FARP1-238ENST00000602015 CLEC3AO75596 197 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 SYN1P17600 705 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 PI3P19957 117 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 ERVFRD-1P60508 538 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 NFIXQ14938 502 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 ERMP1Q7Z2K6 904 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 CNNM2Q9H8M5 875 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 EHMT1Q9H9B1 1298 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 KBTBD4Q9NVX7 518 aa7.36□□□□□ -1.23
FARP1-238ENST00000602015 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
FARP1-238ENST00000602015 GREM1O60565 184 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 VIPR1P32241 457 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 EIF4A3P38919 411 aaKnown RBP7.35□□□□□ -1.23
FARP1-238ENST00000602015 AFF3P51826 1226 aaKnown RBP7.35□□□□□ -1.23
FARP1-238ENST00000602015 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
FARP1-238ENST00000602015 BBS9Q3SYG4 887 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 FBXL19Q6PCT2 694 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 AEBP1Q8IUX7 1158 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 DACT3Q96B18 629 aaPredicted RBP7.35□□□□□ -1.23
FARP1-238ENST00000602015 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 TAF6LQ9Y6J9 622 aa7.35□□□□□ -1.23
FARP1-238ENST00000602015 TRIM13O60858 407 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 FKTNO75072 461 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 PRAMEF1O95521 474 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
FARP1-238ENST00000602015 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 CNTD2Q9H8S5 307 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 CHST7Q9NS84 486 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
FARP1-238ENST00000602015 FANCD2Q9BXW9 1451 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 A0A0G2JLL6 359 aaPredicted RBP7.33□□□□□ -1.24
FARP1-238ENST00000602015 A0A1W2PQ45 241 aaPredicted RBP7.33□□□□□ -1.24
FARP1-238ENST00000602015 A0A1W2PQY0 241 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 FADS2P1A8MWK0 482 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 OVOS1Q6IE37 1185 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 NLRC3Q7RTR2 1065 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 CXorf38Q8TB03 319 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 MZB1Q8WU39 189 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 PRDM14Q9GZV8 571 aa7.33□□□□□ -1.24
FARP1-238ENST00000602015 RSF1Q96T23 1441 aaPredicted RBP7.33□□□□□ -1.24
FARP1-238ENST00000602015 IRS4O14654 1257 aaPredicted RBP7.32□□□□□ -1.24
FARP1-238ENST00000602015 EFEMP2O95967 443 aa7.32□□□□□ -1.24
FARP1-238ENST00000602015 BMP8BP34820 402 aa7.32□□□□□ -1.24
FARP1-238ENST00000602015 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
FARP1-238ENST00000602015 HSF5Q4G112 596 aaPredicted RBP7.32□□□□□ -1.24
FARP1-238ENST00000602015 SP8Q8IXZ3 490 aa7.32□□□□□ -1.24
FARP1-238ENST00000602015 PCDHB12Q9Y5F1 795 aa7.32□□□□□ -1.24
FARP1-238ENST00000602015 ZNF165P49910 485 aa7.31□□□□□ -1.24
FARP1-238ENST00000602015 EPHB3P54753 998 aa7.31□□□□□ -1.24
FARP1-238ENST00000602015 CNKSR3Q6P9H4 555 aa7.31□□□□□ -1.24
FARP1-238ENST00000602015 PANK1Q8TE04 598 aa7.31□□□□□ -1.24
FARP1-238ENST00000602015 ZNF296Q8WUU4 475 aaPredicted RBP7.31□□□□□ -1.24
FARP1-238ENST00000602015 PLCD4Q9BRC7 762 aa7.31□□□□□ -1.24
FARP1-238ENST00000602015 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
FARP1-238ENST00000602015 CYP4F8P98187 520 aa7.3□□□□□ -1.24
FARP1-238ENST00000602015 DBX2Q6ZNG2 339 aa7.3□□□□□ -1.24
FARP1-238ENST00000602015 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
FARP1-238ENST00000602015 MKRN2Q9H000 416 aaKnown RBP7.3□□□□□ -1.24
FARP1-238ENST00000602015 XYLT2Q9H1B5 865 aa7.3□□□□□ -1.24
FARP1-238ENST00000602015 COPRSQ9NQ92 184 aa7.3□□□□□ -1.24
FARP1-238ENST00000602015 KLHL14Q9P2G3 628 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms