RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	COBL	O75128	1261 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	TFRC	P02786	760 aa	Known RBP	18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	MCC	P23508	829 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	COPB2	P35606	906 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	SLC1A4	P43007	532 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	RASGRP2	Q7LDG7	609 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	DPP9	Q86TI2	863 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	TEX13B	Q9BXU2	312 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	SLC38A10	Q9HBR0	1119 aa		18.28	■□□□□ 0.52
PLD3-223	ENST00000600948	TMEM232	C9JQI7	657 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	ZBED4	O75132	1171 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	FARP2	O94887	1054 aa	Predicted RBP	18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	FCER1A	P12319	257 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	STAT2	P52630	851 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	PRPF38B	Q5VTL8	546 aa	Known RBP	18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	MFSD14C	Q5VZR4	134 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	SNRNP48	Q6IEG0	339 aa	Known RBP	18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	RCSD1	Q6JBY9	416 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	FAM160B2	Q86V87	743 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	RUFY2	Q8WXA3	655 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	CHMP4C	Q96CF2	233 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	TMEM47	Q9BQJ4	181 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	CTNNA3	Q9UI47	895 aa		18.27	■□□□□ 0.52
PLD3-223	ENST00000600948	PLA2G6	O60733	806 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	TOP1	P11387	765 aa	Known RBP	18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	CCND3	P30281	292 aa	Predicted RBP	18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	NT5C2	P49902	561 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	IMMT	Q16891	758 aa	Known RBP	18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	OLFML2B	Q68BL8	750 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	CHURC1	Q8WUH1	139 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	ESR2	Q92731	530 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	MMP19	Q99542	508 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	ISY1	Q9ULR0	285 aa	Known RBP	18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	RIPK3	Q9Y572	518 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	SMCHD1	A6NHR9	2005 aa		18.26	■□□□□ 0.51
PLD3-223	ENST00000600948	ALPK3	Q96L96	1907 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	FDX1	P10109	184 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	CYP2C19	P33261	490 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	OAZ1	P54368	228 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	KCTD1	Q719H9	257 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	CPXCR1	Q8N123	301 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	DCAF4	Q8WV16	495 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	RAVER2	Q9HCJ3	691 aa	Known RBP	18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	SLC5A4	Q9NY91	659 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	OGDHL	Q9ULD0	1010 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	CEP290	O15078	2479 aa		18.25	■□□□□ 0.51
PLD3-223	ENST00000600948	SGSM2	O43147	1006 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	KDM4A	O75164	1064 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	IK	Q13123	557 aa	Predicted RBP	18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	KCTD2	Q14681	263 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	LHX8	Q68G74	356 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	ANKLE1	Q8NAG6	615 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	TRPV1	Q8NER1	839 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	MAML3	Q96JK9	1138 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	TTC14	Q96N46	770 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948	MTMR7	Q9Y216	660 aa		18.24	■□□□□ 0.51
PLD3-223	ENST00000600948		B4E1Z4	1266 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	PGK2	P07205	417 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	CYBA	P13498	195 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	MNX1	P50219	401 aa	Predicted RBP	18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	PTH1R	Q03431	593 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	CCDC96	Q2M329	555 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	SKAP1	Q86WV1	359 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	ZKSCAN3	Q9BRR0	538 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	PRR12	Q9ULL5	1215 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	ZNF536	O15090	1300 aa		18.23	■□□□□ 0.51
PLD3-223	ENST00000600948	MCM3AP	O60318	1980 aa		18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	PDHB	P11177	359 aa		18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	SLC4A3	P48751	1232 aa		18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	ZNF792	Q3KQV3	632 aa		18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	DGKH	Q86XP1	1220 aa		18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	DIS3L	Q8TF46	1054 aa	Known RBP	18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	PAWR	Q96IZ0	340 aa	Known RBP	18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	DIS3	Q9Y2L1	958 aa	Known RBP	18.22	■□□□□ 0.51
PLD3-223	ENST00000600948	SNHG28	P0DPA3	235 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	TTBK2	Q6IQ55	1244 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	BTNL9	Q6UXG8	535 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	IQCA1	Q86XH1	822 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	CHST13	Q8NET6	341 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	HTATIP2	Q9BUP3	242 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	KRT23	Q9C075	422 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	CNNM2	Q9H8M5	875 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	ZSWIM5	Q9P217	1185 aa		18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.21	■□□□□ 0.51
PLD3-223	ENST00000600948	DNAJC25-GNG10	A0A024R161	153 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	SNAP25	P60880	206 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	CCDC178	Q5BJE1	867 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	NECAB2	Q7Z6G3	386 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	ANKS1A	Q92625	1134 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	AGBL1	Q96MI9	1066 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	GPCPD1	Q9NPB8	672 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	FBXO40	Q9UH90	709 aa		18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	DDX20	Q9UHI6	824 aa	Known RBP	18.2	■□□□□ 0.5
PLD3-223	ENST00000600948		U3KPZ7	1027 aa	Predicted RBP	18.2	■□□□□ 0.5
PLD3-223	ENST00000600948	MSC	O60682	206 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	CYP21A2	P08686	494 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms