RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 MCM2P49736 904 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 PPP2R5BQ15173 497 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 Q6ZUG5 572 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 DIS3LQ8TF46 1054 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 LPAR1Q92633 364 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 HTATIP2Q9BUP3 242 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
CHMP2A-207ENST00000600804 CDH23Q9H251 3354 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 DDAH1O94760 285 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 TROAPQ12815 778 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 SPP2Q13103 211 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 IRF5Q13568 498 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 ACER1Q8TDN7 264 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 PXYLP1Q8TE99 480 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 ZNF274Q96GC6 653 aaPredicted RBP13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 TCEANC2Q96MN5 208 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 GOPCQ9HD26 462 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
CHMP2A-207ENST00000600804 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CALM1P0DP23 149 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CALM2P0DP24 149 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CALM3P0DP25 149 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 AK2P54819 239 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 FGD1P98174 961 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 TRIM32Q13049 653 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 APOA5Q6Q788 366 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 FASTKD5Q7L8L6 764 aaKnown RBP13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CATIPQ7Z7H3 387 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CLEC10AQ8IUN9 316 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 SNX21Q969T3 373 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 GMCL1Q96IK5 515 aa13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 PAWRQ96IZ0 340 aaKnown RBP13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
CHMP2A-207ENST00000600804 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 F5H6K3 240 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 TNPO2O14787 897 aaKnown RBP13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 PLA2G6O60733 806 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 KLRC3Q07444 240 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 BRF1Q92994 677 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 FEZ1Q99689 392 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 SLC12A7Q9Y666 1083 aa13.59□□□□□ -0.23
CHMP2A-207ENST00000600804 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 PEX10O60683 326 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 NDUFB10O96000 172 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 PDHBP11177 359 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 ATP2B2Q01814 1243 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 MTMR2Q13614 643 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 GPATCH4Q5T3I0 446 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 SLFN13Q68D06 897 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 NR2E3Q9Y5X4 410 aa13.58□□□□□ -0.24
CHMP2A-207ENST00000600804 BAZ2BQ9UIF8 2168 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 ZBTB43O43298 467 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 EVI5O60447 810 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 SMARCA1P28370 1054 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 APOBRQ0VD83 1088 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 GRM4Q14833 912 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 FAM110CQ1W6H9 321 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 GDF15Q99988 308 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 TMOD4Q9NZQ9 345 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 GJD2Q9UKL4 321 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
CHMP2A-207ENST00000600804 RLFQ13129 1914 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms