RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
PPFIA4-212ENST00000600447 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
PPFIA4-212ENST00000600447 TRIOBPQ9H2D6 2365 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 MSCO60682 206 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 ZBED4O75132 1171 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 BMP3P12645 472 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 CYBAP13498 195 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 STX8Q9UNK0 236 aa17.05■□□□□ 0.32
PPFIA4-212ENST00000600447 NMT2O60551 498 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 FDX1P10109 184 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 NOVP48745 357 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 KCTD2Q14681 263 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 TRPV1Q8NER1 839 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 MAML3Q96JK9 1138 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 C11orf49Q9H6J7 331 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 DDX20Q9UHI6 824 aaKnown RBP17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
PPFIA4-212ENST00000600447 TMEM232C9JQI7 657 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 EVI5O60447 810 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 PDE4AP27815 886 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 CNGA1P29973 690 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 SLC1A4P43007 532 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 STAT2P52630 851 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 OAZ1P54368 228 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
PPFIA4-212ENST00000600447 PLA2G6O60733 806 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 PGK2P07205 417 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 MCCP23508 829 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 HAND2P61296 217 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 ZNF792Q3KQV3 632 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
PPFIA4-212ENST00000600447 PFASO15067 1338 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 COL6A1P12109 1028 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 CPXCR1Q8N123 301 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 RNF41Q9H4P4 317 aaPredicted RBP17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 RAVER2Q9HCJ3 691 aaKnown RBP17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 NRBP1Q9UHY1 535 aa17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
PPFIA4-212ENST00000600447 SEPT4O43236 478 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
PPFIA4-212ENST00000600447 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 CHST13Q8NET6 341 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 DCAF4Q8WV16 495 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 TINF2Q9BSI4 451 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 FBXO40Q9UH90 709 aa17■□□□□ 0.31
PPFIA4-212ENST00000600447 MCM3APO60318 1980 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 DNAJC25-GNG10A0A024R161 153 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 ZNF213O14771 459 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 NT5C2P49902 561 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 PRAMEF19Q5SWL8 479 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 KCTD1Q719H9 257 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 MSL3Q8N5Y2 521 aaKnown RBP16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
PPFIA4-212ENST00000600447 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 ARRDC4Q8NCT1 418 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 ESR2Q92731 530 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 TTC14Q96N46 770 aa16.98■□□□□ 0.31
PPFIA4-212ENST00000600447 ZNF536O15090 1300 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 NEDD4P46934 1319 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 DNM1LO00429 736 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 RASGRP2Q7LDG7 609 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 ZNF467Q7Z7K2 595 aaPredicted RBP16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
PPFIA4-212ENST00000600447 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.31
PPFIA4-212ENST00000600447 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
PPFIA4-212ENST00000600447 TKFCQ3LXA3 575 aa16.96■□□□□ 0.31
PPFIA4-212ENST00000600447 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
PPFIA4-212ENST00000600447 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms