RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 SASS6Q6UVJ0 657 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-218ENST00000600383 MKL1Q969V6 931 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 FUCA2Q9BTY2 467 aa17.37■□□□□ 0.37
HIF3A-218ENST00000600383 SMCO2A6NFE2 343 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 FZD9O00144 591 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 CUTAO60888 179 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 GRIN1Q05586 938 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 TTC38Q5R3I4 469 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
HIF3A-218ENST00000600383 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 ZBED3Q96IU2 234 aaPredicted RBP17.36■□□□□ 0.37
HIF3A-218ENST00000600383 FHDC1Q9C0D6 1143 aaPredicted RBP17.36■□□□□ 0.37
HIF3A-218ENST00000600383 MYH4Q9Y623 1939 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 F5H6K3 240 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 RPS12P25398 132 aaKnown RBP17.36■□□□□ 0.37
HIF3A-218ENST00000600383 KLRC3Q07444 240 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
HIF3A-218ENST00000600383 COA7Q96BR5 231 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 JMJD4Q9H9V9 463 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 PCDHA6Q9UN73 950 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 PCDHA8Q9Y5H6 950 aa17.36■□□□□ 0.37
HIF3A-218ENST00000600383 MCM7P33993 719 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 SYKP43405 635 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 TYRO3Q06418 890 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 RASA3Q14644 834 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 FBXO2Q9UK22 296 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-218ENST00000600383 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 CTAGE5O15320 804 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 PTPREP23469 700 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 TNNI2P48788 182 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 ZNF280AP59817 542 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-218ENST00000600383 RESP18Q5W5W9 173 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 NUP88Q99567 741 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-218ENST00000600383 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
HIF3A-218ENST00000600383 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-218ENST00000600383 GNA11P29992 359 aa17.34■□□□□ 0.37
HIF3A-218ENST00000600383 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
HIF3A-218ENST00000600383 RBM43Q6ZSC3 357 aaKnown RBP17.34■□□□□ 0.37
HIF3A-218ENST00000600383 SPICE1Q8N0Z3 855 aa17.34■□□□□ 0.37
HIF3A-218ENST00000600383 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-218ENST00000600383 SRPRBQ9Y5M8 271 aaKnown RBP17.34■□□□□ 0.37
HIF3A-218ENST00000600383 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-218ENST00000600383 ZNF541Q9H0D2 1346 aa17.34■□□□□ 0.37
HIF3A-218ENST00000600383 IKQ13123 557 aaPredicted RBP17.33■□□□□ 0.37
HIF3A-218ENST00000600383 PTGDRQ13258 359 aa17.33■□□□□ 0.37
HIF3A-218ENST00000600383 INF2Q27J81 1249 aa17.33■□□□□ 0.37
HIF3A-218ENST00000600383 DPF2Q92785 391 aa17.33■□□□□ 0.37
HIF3A-218ENST00000600383 PNMA6FA0A0J9YX94 578 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 M0R2N6 131 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 ECE1P42892 770 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.36
HIF3A-218ENST00000600383 KCNH3Q9ULD8 1083 aa17.33■□□□□ 0.36
HIF3A-218ENST00000600383 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.36
HIF3A-218ENST00000600383 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 ANO6Q4KMQ2 910 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 A0A087WWV3 80 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 NDUFB10O96000 172 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 JAKMIP3Q5VZ66 844 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 HACL1Q9UJ83 578 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 ZBTB21Q9ULJ3 1066 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 HPSEQ9Y251 543 aa17.32■□□□□ 0.36
HIF3A-218ENST00000600383 H7C1D1 291 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 ZBTB5O15062 677 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 TBC1D12O60347 775 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 BMP15O95972 392 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 PDILTQ8N807 584 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 ACER1Q8TDN7 264 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
HIF3A-218ENST00000600383 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 TMEM232C9JQI7 657 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-218ENST00000600383 LMNB1P20700 586 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 CAP2P40123 477 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 MMP14P50281 582 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 SNAP25P60880 206 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 hCG_1984214I3L0E3 225 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 BMP3P12645 472 aa17.3■□□□□ 0.36
HIF3A-218ENST00000600383 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
HIF3A-218ENST00000600383 CCDC84Q86UT8 332 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-218ENST00000600383 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
HIF3A-218ENST00000600383 ZNF713Q8N859 430 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-218ENST00000600383 DNAJC25Q9H1X3 360 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms