RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 RAG1P15918 1043 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 MAMDC4Q6UXC1 1216 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 NUP133Q8WUM0 1156 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 APPBP2Q92624 585 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 TOX2Q96NM4 488 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
SMG9-210ENST00000600097 RCAN3Q9UKA8 241 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 FAM184BQ9ULE4 1060 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
SMG9-210ENST00000600097 SMCHD1A6NHR9 2005 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 MOXD2PA6NHM9 499 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 MINDY4BA8MYZ0 360 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
SMG9-210ENST00000600097 PQBP1O60828 265 aaKnown RBP20.54■□□□□ 0.88
SMG9-210ENST00000600097 ZBED4O75132 1171 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 NDUFB10O96000 172 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 GNAT2P19087 354 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 ZNF467Q7Z7K2 595 aaPredicted RBP20.54■□□□□ 0.88
SMG9-210ENST00000600097 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 CTDP1Q9Y5B0 961 aaPredicted RBP20.54■□□□□ 0.88
SMG9-210ENST00000600097 MYH7P12883 1935 aa20.54■□□□□ 0.88
SMG9-210ENST00000600097 DNAJC25-GNG10A0A024R161 153 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 DCDC2CA8MYV0 355 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 ZFYP08048 801 aaPredicted RBP20.53■□□□□ 0.88
SMG9-210ENST00000600097 ITGB8P26012 769 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 ACLYP53396 1101 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 ANKRD33Q7Z3H0 272 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 OSBP2Q969R2 916 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 RNPC3Q96LT9 517 aaKnown RBP20.53■□□□□ 0.88
SMG9-210ENST00000600097 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
SMG9-210ENST00000600097 STARD7Q9NQZ5 370 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 TMEM39AQ9NV64 488 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 CLIP2Q9UDT6 1046 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 RIPK3Q9Y572 518 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
SMG9-210ENST00000600097 UNC80Q8N2C7 3258 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 TMEM265A0A087WTH1 108 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 DUSP11O75319 330 aaKnown RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 SNAI1O95863 264 aaPredicted RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMG9-210ENST00000600097 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 CPXCR1Q8N123 301 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 STK11IPQ8N1F8 1099 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 MKL1Q969V6 931 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 LENG1Q96BZ8 264 aaPredicted RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 FBXO40Q9UH90 709 aa20.52■□□□□ 0.88
SMG9-210ENST00000600097 GREB1LQ9C091 1923 aaPredicted RBP20.52■□□□□ 0.88
SMG9-210ENST00000600097 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 GPAA1O43292 621 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 TDO2P48775 406 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 FPGSQ05932 587 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
SMG9-210ENST00000600097 KLHDC9Q8NEP7 349 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 MAFAQ8NHW3 353 aaPredicted RBP20.51■□□□□ 0.87
SMG9-210ENST00000600097 SLC38A10Q9HBR0 1119 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 FEM1BQ9UK73 627 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 ZHX1Q9UKY1 873 aaPredicted RBP20.51■□□□□ 0.87
SMG9-210ENST00000600097 PLXNA1Q9UIW2 1896 aa20.51■□□□□ 0.87
SMG9-210ENST00000600097 CST5P28325 142 aaPredicted RBP20.5■□□□□ 0.87
SMG9-210ENST00000600097 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 OAZ1P54368 228 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 FAAP100Q0VG06 881 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 KCNA10Q16322 511 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 CCSAPQ6IQ19 270 aaPredicted RBP20.5■□□□□ 0.87
SMG9-210ENST00000600097 ANKRD35Q8N283 1001 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 PCSK9Q8NBP7 692 aaKnown RBP20.5■□□□□ 0.87
SMG9-210ENST00000600097 CHST13Q8NET6 341 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 KIFC2Q96AC6 838 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
SMG9-210ENST00000600097 ABHD16BQ9H3Z7 469 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 SPC25Q9HBM1 224 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 ELP1O95163 1332 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 MROH7Q68CQ1 1323 aa20.5■□□□□ 0.87
SMG9-210ENST00000600097 TTLL1O95922 423 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 APPP05067 770 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 FDX1P10109 184 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 EPHB4P54760 987 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
SMG9-210ENST00000600097 RAVER2Q9HCJ3 691 aaKnown RBP20.49■□□□□ 0.87
SMG9-210ENST00000600097 EPB41L4AQ9HCS5 686 aaPredicted RBP20.49■□□□□ 0.87
SMG9-210ENST00000600097 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.49■□□□□ 0.87
SMG9-210ENST00000600097 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
SMG9-210ENST00000600097 C20orf194Q5TEA3 1177 aa20.48■□□□□ 0.87
SMG9-210ENST00000600097 MYLIPQ8WY64 445 aa20.48■□□□□ 0.87
SMG9-210ENST00000600097 NACAP1Q9BZK3 213 aa20.48■□□□□ 0.87
SMG9-210ENST00000600097 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.47■□□□□ 0.87
SMG9-210ENST00000600097 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.47■□□□□ 0.87
SMG9-210ENST00000600097 PRDM1O75626 825 aa20.47■□□□□ 0.87
SMG9-210ENST00000600097 TIMP1P01033 207 aa20.47■□□□□ 0.87
SMG9-210ENST00000600097 C6orf222P0C671 652 aaPredicted RBP20.47■□□□□ 0.87
SMG9-210ENST00000600097 PDE4BQ07343 736 aa20.47■□□□□ 0.87
SMG9-210ENST00000600097 IFNL3Q8IZI9 196 aa20.47■□□□□ 0.87
SMG9-210ENST00000600097 SLC3A2P08195 630 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms