RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 ELNP15502 786 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 CCNA1P78396 465 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
FARP1-228ENST00000600032 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 RNF19BQ6ZMZ0 732 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 DPF3Q92784 378 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 SHISA4Q96DD7 197 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
FARP1-228ENST00000600032 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
FARP1-228ENST00000600032 MYH7P12883 1935 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
FARP1-228ENST00000600032 CLCN1P35523 988 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 ERVK-24P63145 666 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
FARP1-228ENST00000600032 HAUS7Q99871 368 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
FARP1-228ENST00000600032 MYH8P13535 1937 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 TCRBV5S4A2TA0A5A2 114 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 SHMT1P34896 483 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 ADD2P35612 726 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 PLCD1P51178 756 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 MMP16P51512 607 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 JAG1P78504 1218 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
FARP1-228ENST00000600032 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 GPCPD1Q9NPB8 672 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
FARP1-228ENST00000600032 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 RABGAP1Q9Y3P9 1069 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 NR2E3Q9Y5X4 410 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 RPTORQ8N122 1335 aa11.07□□□□□ -0.64
FARP1-228ENST00000600032 MBD4O95243 580 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
FARP1-228ENST00000600032 VCAM1P19320 739 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 RGS2P41220 211 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 GABPAQ06546 454 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
FARP1-228ENST00000600032 LRRFIP1Q32MZ4 808 aaKnown RBP11.06□□□□□ -0.64
FARP1-228ENST00000600032 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
FARP1-228ENST00000600032 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
FARP1-228ENST00000600032 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
FARP1-228ENST00000600032 H0YGN5 161 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 CYP2B6P20813 491 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 LPAR1Q92633 364 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 ARMT1Q9H993 441 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 ARHGEF10LQ9HCE6 1279 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 ECHDC1Q9NTX5 307 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
FARP1-228ENST00000600032 SEPT2Q15019 361 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 C20orf194Q5TEA3 1177 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 WDR78Q5VTH9 848 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
FARP1-228ENST00000600032 APBA2Q99767 749 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 RPAP3Q9H6T3 665 aaPredicted RBP11.04□□□□□ -0.64
FARP1-228ENST00000600032 TOR4AQ9NXH8 423 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
FARP1-228ENST00000600032 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
FARP1-228ENST00000600032 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
FARP1-228ENST00000600032 ICA1Q05084 483 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 MB21D1Q8N884 522 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 TRIB2Q92519 343 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 PORCNQ9H237 461 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 DCTPP1Q9H773 170 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
FARP1-228ENST00000600032 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
FARP1-228ENST00000600032 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
FARP1-228ENST00000600032 USP17L12C9JPN9 530 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms