RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TAL1P17542 331 aaPredicted RBP25.3■■□□□ 1.64
PNKP-212ENST00000599454 GNAT2P19087 354 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 SMAD3P84022 425 aaKnown RBP25.3■■□□□ 1.64
PNKP-212ENST00000599454 SNRNP48Q6IEG0 339 aaKnown RBP25.3■■□□□ 1.64
PNKP-212ENST00000599454 SH3RF1Q7Z6J0 888 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 SYNPO2Q9UMS6 1093 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 A0A1W2PQ45 241 aaPredicted RBP25.29■■□□□ 1.64
PNKP-212ENST00000599454 A0A1W2PQY0 241 aa25.29■■□□□ 1.64
PNKP-212ENST00000599454 DDX11Q96FC9 970 aa25.29■■□□□ 1.64
PNKP-212ENST00000599454 FAM161BQ96MY7 647 aa25.29■■□□□ 1.64
PNKP-212ENST00000599454 NUP88Q99567 741 aaPredicted RBP25.29■■□□□ 1.64
PNKP-212ENST00000599454 KIAA0355O15063 1070 aa25.28■■□□□ 1.64
PNKP-212ENST00000599454 RNF113AO15541 343 aaKnown RBP25.28■■□□□ 1.64
PNKP-212ENST00000599454 ADAMTS4O75173 837 aa25.28■■□□□ 1.64
PNKP-212ENST00000599454 MAMDC4Q6UXC1 1216 aa25.28■■□□□ 1.64
PNKP-212ENST00000599454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.28■■□□□ 1.64
PNKP-212ENST00000599454 ZNF467Q7Z7K2 595 aaPredicted RBP25.28■■□□□ 1.64
PNKP-212ENST00000599454 OSBP2Q969R2 916 aa25.28■■□□□ 1.64
PNKP-212ENST00000599454 FAM184BQ9ULE4 1060 aa25.28■■□□□ 1.64
PNKP-212ENST00000599454 DNAJC25-GNG10A0A024R161 153 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 IGKV6D-41A0A0C4DH26 115 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 ZBED4O75132 1171 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 LRRFIP1Q32MZ4 808 aaKnown RBP25.27■■□□□ 1.64
PNKP-212ENST00000599454 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.27■■□□□ 1.64
PNKP-212ENST00000599454 ZNF444Q8N0Y2 327 aaPredicted RBP25.27■■□□□ 1.64
PNKP-212ENST00000599454 NUP133Q8WUM0 1156 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 MKL1Q969V6 931 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 TOX2Q96NM4 488 aa25.27■■□□□ 1.64
PNKP-212ENST00000599454 CTDP1Q9Y5B0 961 aaPredicted RBP25.27■■□□□ 1.64
PNKP-212ENST00000599454 LAMA2P24043 3122 aaKnown RBP25.26■■□□□ 1.63
PNKP-212ENST00000599454 MOXD2PA6NHM9 499 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 GPAA1O43292 621 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 RAG1P15918 1043 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 TDO2P48775 406 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 STK11IPQ8N1F8 1099 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 SEMA6BQ9H3T3 888 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 DCTPP1Q9H773 170 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 CLIP2Q9UDT6 1046 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 FEM1BQ9UK73 627 aa25.26■■□□□ 1.63
PNKP-212ENST00000599454 PQBP1O60828 265 aaKnown RBP25.25■■□□□ 1.63
PNKP-212ENST00000599454 ACLYP53396 1101 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 OAZ1P54368 228 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 ANKRD33Q7Z3H0 272 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 KLHDC9Q8NEP7 349 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 CDX2Q99626 313 aaPredicted RBP25.25■■□□□ 1.63
PNKP-212ENST00000599454 SLC38A10Q9HBR0 1119 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 EPB41L4AQ9HCS5 686 aaPredicted RBP25.25■■□□□ 1.63
PNKP-212ENST00000599454 STARD7Q9NQZ5 370 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 FBXO40Q9UH90 709 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 RIPK3Q9Y572 518 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 SYNRGQ9UMZ2 1314 aa25.25■■□□□ 1.63
PNKP-212ENST00000599454 TMEM265A0A087WTH1 108 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 DUSP11O75319 330 aaKnown RBP25.24■■□□□ 1.63
PNKP-212ENST00000599454 SNAI1O95863 264 aaPredicted RBP25.24■■□□□ 1.63
PNKP-212ENST00000599454 CPXCR1Q8N123 301 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 GMCL1P1Q8NEA9 526 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 CHST13Q8NET6 341 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 LENG1Q96BZ8 264 aaPredicted RBP25.24■■□□□ 1.63
PNKP-212ENST00000599454 TMEM39AQ9NV64 488 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 MTMR4Q9NYA4 1195 aa25.24■■□□□ 1.63
PNKP-212ENST00000599454 ZHX1Q9UKY1 873 aaPredicted RBP25.24■■□□□ 1.63
PNKP-212ENST00000599454 PLIN4Q96Q06 1357 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 DCDC2CA8MYV0 355 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 TTLL1O95922 423 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 APPP05067 770 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 FDX1P10109 184 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 ITGB8P26012 769 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 CST5P28325 142 aaPredicted RBP25.23■■□□□ 1.63
PNKP-212ENST00000599454 FPGSQ05932 587 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 KIFC2Q96AC6 838 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 CEP95Q96GE4 821 aa25.23■■□□□ 1.63
PNKP-212ENST00000599454 RNPC3Q96LT9 517 aaKnown RBP25.23■■□□□ 1.63
PNKP-212ENST00000599454 MROH7Q68CQ1 1323 aa25.22■■□□□ 1.63
PNKP-212ENST00000599454 PATL2C9JE40 543 aaKnown RBP25.22■■□□□ 1.63
PNKP-212ENST00000599454 ANKRD35Q8N283 1001 aa25.22■■□□□ 1.63
PNKP-212ENST00000599454 PCSK9Q8NBP7 692 aaKnown RBP25.22■■□□□ 1.63
PNKP-212ENST00000599454 NACAP1Q9BZK3 213 aa25.22■■□□□ 1.63
PNKP-212ENST00000599454 ABHD16BQ9H3Z7 469 aa25.22■■□□□ 1.63
PNKP-212ENST00000599454 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.22■■□□□ 1.63
PNKP-212ENST00000599454 ELP1O95163 1332 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 M0R2C6 588 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 PDE4BQ07343 736 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 FAAP100Q0VG06 881 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 ACVR2BQ13705 512 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 KCNA10Q16322 511 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 CCSAPQ6IQ19 270 aaPredicted RBP25.21■■□□□ 1.63
PNKP-212ENST00000599454 IFNL3Q8IZI9 196 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 SPC25Q9HBM1 224 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 RAVER2Q9HCJ3 691 aaKnown RBP25.21■■□□□ 1.63
PNKP-212ENST00000599454 MYO9BQ13459 2157 aa25.21■■□□□ 1.63
PNKP-212ENST00000599454 TTC41PQ6P2S7 1318 aa25.2■■□□□ 1.62
PNKP-212ENST00000599454 PRDM1O75626 825 aa25.2■■□□□ 1.62
PNKP-212ENST00000599454 SLC3A2P08195 630 aaKnown RBP25.2■■□□□ 1.62
PNKP-212ENST00000599454 SLC4A3P48751 1232 aa25.2■■□□□ 1.62
PNKP-212ENST00000599454 NEDD1Q8NHV4 660 aa25.2■■□□□ 1.62
PNKP-212ENST00000599454 GLT1D1Q96MS3 346 aa25.2■■□□□ 1.62
PNKP-212ENST00000599454 COL25A1Q9BXS0 654 aaPredicted RBP25.2■■□□□ 1.62
PNKP-212ENST00000599454 TTYH1Q9H313 450 aaPredicted RBP25.2■■□□□ 1.62
PNKP-212ENST00000599454 TSPY3P0CV98 308 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms