RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 C2CD2LO14523 706 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 PCSK2P16519 638 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
SMG9-207ENST00000598860 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMG9-207ENST00000598860 AOC3Q16853 763 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 GPC2Q8N158 579 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
SMG9-207ENST00000598860 WDR90Q96KV7 1748 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 EYA2O00167 538 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 IGHDP01880 384 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 LDHBP07195 334 aaKnown RBP12.69□□□□□ -0.38
SMG9-207ENST00000598860 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
SMG9-207ENST00000598860 OS9Q13438 667 aaPredicted RBP12.69□□□□□ -0.38
SMG9-207ENST00000598860 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 FAM13BQ9NYF5 915 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 ZNRF3Q9ULT6 936 aa12.69□□□□□ -0.38
SMG9-207ENST00000598860 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 GPSM2P81274 684 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 HACL1Q9UJ83 578 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 KCNH4Q9UQ05 1017 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 EXOC6BQ9Y2D4 811 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 LTBP1Q14766 1721 aa12.68□□□□□ -0.38
SMG9-207ENST00000598860 COL4A1P02462 1669 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 MROH5Q6ZUA9 1318 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 INPP5BP32019 993 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 MAP2K3P46734 347 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 EYA3Q99504 573 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
SMG9-207ENST00000598860 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
SMG9-207ENST00000598860 POLLQ9UGP5 575 aa12.67□□□□□ -0.38
SMG9-207ENST00000598860 PA2G4Q9UQ80 394 aaKnown RBP12.67□□□□□ -0.38
SMG9-207ENST00000598860 OPLAHO14841 1288 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
SMG9-207ENST00000598860 RECKO95980 971 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 TCF3P15923 654 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 EPHX2P34913 555 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 ARSDP51689 593 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 FGD1P98174 961 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 CXCL9Q07325 125 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 TNIP1Q15025 636 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 SIL1Q9H173 461 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 COL4A5P29400 1685 aa12.66□□□□□ -0.38
SMG9-207ENST00000598860 SCN4AP35499 1836 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
SMG9-207ENST00000598860 TBC1D16Q8TBP0 767 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 PIK3R5Q8WYR1 880 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
SMG9-207ENST00000598860 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 GPR108Q9NPR9 543 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
SMG9-207ENST00000598860 ZNF609O15014 1411 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 PNMA6FA0A0J9YX94 578 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 RAD17O75943 681 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 UFL1O94874 794 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
SMG9-207ENST00000598860 EPB42P16452 691 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
SMG9-207ENST00000598860 NUCB1Q02818 461 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
SMG9-207ENST00000598860 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
SMG9-207ENST00000598860 SLC30A3Q99726 388 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
SMG9-207ENST00000598860 XDHP47989 1333 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 A6NHS1 94 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 SASH1O94885 1247 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
SMG9-207ENST00000598860 EPS15P42566 896 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 MRPL58Q14197 206 aaKnown RBP12.63□□□□□ -0.39
SMG9-207ENST00000598860 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
SMG9-207ENST00000598860 PUS3Q9BZE2 481 aaKnown RBP12.63□□□□□ -0.39
SMG9-207ENST00000598860 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
SMG9-207ENST00000598860 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 PDE8BO95263 885 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 CHRNDQ07001 517 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 SPEM2Q0P670 501 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
SMG9-207ENST00000598860 WHAMMQ8TF30 809 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms