RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 TSPY26PQ9H489 355 aa6.16□□□□□ -1.42
PAF1-208ENST00000598594 IFT22Q9H7X7 185 aa6.16□□□□□ -1.42
PAF1-208ENST00000598594 C1orf112Q9NSG2 853 aa6.16□□□□□ -1.42
PAF1-208ENST00000598594 PDP2Q9P2J9 529 aa6.16□□□□□ -1.42
PAF1-208ENST00000598594 RABL2BQ9UNT1 228 aa6.16□□□□□ -1.42
PAF1-208ENST00000598594 TRIM64A6NGJ6 449 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 TRIM64BA6NI03 449 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 TRIM75PA6NK02 468 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 EYA2O00167 538 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 NCAM2O15394 837 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 KPNA6O60684 536 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 PRKD3O94806 890 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 MT-CO1P00395 513 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 IMPDH2P12268 514 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 RHCEP18577 417 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 POU3F2P20265 443 aaPredicted RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 RPS6KB1P23443 525 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 GALNSP34059 522 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 CTNNA1P35221 906 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 IARSP41252 1262 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 SLC19A1P41440 591 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 RECQLP46063 649 aaPredicted RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 BPIFB3P59826 476 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 RHDQ02161 417 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 PPP2R5CQ13362 524 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 SMC1AQ14683 1233 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 PCBP2Q15366 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
PAF1-208ENST00000598594 CWF19L2Q2TBE0 894 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 GPATCH4Q5T3I0 446 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 ITPRIPL1Q6GPH6 555 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 TRIM67Q6ZTA4 783 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 CHST15Q7LFX5 561 aaPredicted RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 CATIPQ7Z7H3 387 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 ANKLE1Q8NAG6 615 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 ZFPM2Q8WW38 1151 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 VMP1Q96GC9 406 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 SEC62Q99442 399 aaKnown RBP6.15□□□□□ -1.42
PAF1-208ENST00000598594 MAP3K14Q99558 947 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 FAM167BQ9BTA0 163 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 SLC13A1Q9BZW2 595 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 DBNDD1Q9H9R9 158 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 RSAD1Q9HA92 442 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 BRMS1Q9HCU9 246 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 SEL1LQ9UBV2 794 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 PPM1HQ9ULR3 514 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 PTPN22Q9Y2R2 807 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 CRYL1Q9Y2S2 319 aa6.15□□□□□ -1.42
PAF1-208ENST00000598594 RNF223E7ERA6 249 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 APBA3O96018 575 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 CELA3AP09093 270 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 ZNF132P52740 706 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 PPFIA1Q13136 1202 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 AGERQ15109 404 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TERF2Q15554 542 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 UVSSAQ2YD98 709 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 RGL3Q3MIN7 710 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 SLC45A4Q5BKX6 768 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TMEM240Q5SV17 173 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 SH3PXD2AQ5TCZ1 1133 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TMCO3Q6UWJ1 677 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 XKR5Q6UX68 686 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TPTE2Q6XPS3 522 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 BNC2Q6ZN30 1099 aaPredicted RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 BRINP3Q76B58 766 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 WAPLQ7Z5K2 1190 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 DAAM2Q86T65 1068 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TTC6Q86TZ1 520 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 SAPCD2Q86UD0 394 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 ZNF598Q86UK7 904 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 REXO1Q8N1G1 1221 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 FAM43AQ8N2R8 423 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 C19orf47Q8N9M1 422 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 SMARCC1Q92922 1105 aaPredicted RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 HSPBAP1Q96EW2 488 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 RSRC1Q96IZ7 334 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 CFAP53Q96M91 514 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 MENTQ9BUN1 341 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 MRPL9Q9BYD2 267 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 WDR12Q9GZL7 423 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 ABCG4Q9H172 646 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 UNC45AQ9H3U1 944 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 OSBPL3Q9H4L5 887 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 PLEKHA5Q9HAU0 1116 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 AGO4Q9HCK5 861 aaKnown RBP6.14□□□□□ -1.43
PAF1-208ENST00000598594 PDLIM7Q9NR12 457 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 PPP1R9AQ9ULJ8 1098 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 DNM3Q9UQ16 869 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
PAF1-208ENST00000598594 TRBV23-1A0A0A0MS06 115 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 EML1O00423 815 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 AREL1O15033 823 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 SUSD5O60279 629 aa6.13□□□□□ -1.43
PAF1-208ENST00000598594 ZEB2O60315 1214 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms