RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 LONRF2Q1L5Z9 754 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 IFT81Q8WYA0 676 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 EYA3Q99504 573 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
USHBP1-207ENST00000597928 FCER1AP12319 257 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
USHBP1-207ENST00000597928 DPYDQ12882 1025 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 INTS5Q6P9B9 1019 aaKnown RBP13.91□□□□□ -0.18
USHBP1-207ENST00000597928 PIGSQ96S52 555 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 MST1RQ04912 1400 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 NFIXQ14938 502 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 UBE2SQ16763 222 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 TBC1D10BQ4KMP7 808 aaPredicted RBP13.91□□□□□ -0.18
USHBP1-207ENST00000597928 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 EFCAB8A8MWE9 144 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 CAMTA2O94983 1202 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 CALML3P27482 149 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 RRAGAQ7L523 313 aa13.91□□□□□ -0.18
USHBP1-207ENST00000597928 EPN1Q9Y6I3 576 aaPredicted RBP13.91□□□□□ -0.18
USHBP1-207ENST00000597928 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 TRAF5O00463 557 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 USH1GQ495M9 461 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 ABCB6Q9NP58 842 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 PLCG1P19174 1290 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 MAEAQ7L5Y9 396 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 JAKMIP2Q96AA8 810 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
USHBP1-207ENST00000597928 RMND1Q9NWS8 449 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
USHBP1-207ENST00000597928 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 ZNF185O15231 689 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 ZNF76P36508 570 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 BTDP43251 543 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 CNBD1Q8NA66 436 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 PROCA1Q8NCQ7 364 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 HSD3B7Q9H2F3 369 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 DUSP10Q9Y6W6 482 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 FER1L4A9Z1Z3 1794 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 POTEMA6NI47 508 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 MFAP3LO75121 409 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 TADA3O75528 432 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 PKN1Q16512 942 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 FGFR2P21802 821 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
USHBP1-207ENST00000597928 LLGL1Q15334 1064 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 GRIK5Q16478 980 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 TRIM65Q6PJ69 517 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 JCADQ9P266 1359 aa13.89□□□□□ -0.19
USHBP1-207ENST00000597928 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 RNF225M0QZC1 329 aaPredicted RBP13.88□□□□□ -0.19
USHBP1-207ENST00000597928 HNRNPH2P55795 449 aaKnown RBP13.88□□□□□ -0.19
USHBP1-207ENST00000597928 UBE4AQ14139 1066 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 TBCKQ8TEA7 893 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 NSUN4Q96CB9 384 aaKnown RBP13.88□□□□□ -0.19
USHBP1-207ENST00000597928 BPIFA3Q9BQP9 254 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 FAM205AQ6ZU69 1335 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 CHMP2AO43633 222 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 NTSR2O95665 410 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 GYPCP04921 128 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 TROAPQ12815 778 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.19
USHBP1-207ENST00000597928 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 GSDMAQ96QA5 445 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 MORC2Q9Y6X9 1032 aaPredicted RBP13.88□□□□□ -0.19
USHBP1-207ENST00000597928 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 BMP15O95972 392 aa13.88□□□□□ -0.19
USHBP1-207ENST00000597928 SPAG1Q07617 926 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms