RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 ANO9A1A5B4 782 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 H7C1D1 291 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
IRF3-219ENST00000597636 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
IRF3-219ENST00000597636 CCDC91Q7Z6B0 441 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 IRF2BP1Q8IU81 584 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 AMOTL1Q8IY63 956 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 MTRQ99707 1265 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 PHF20Q9BVI0 1012 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 SHTN1A0MZ66 631 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 GSG1L2A8MUP6 293 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 PARP1P09874 1014 aaKnown RBP17.4■□□□□ 0.38
IRF3-219ENST00000597636 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
IRF3-219ENST00000597636 ZNF174Q15697 407 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 IQCEQ6IPM2 695 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
IRF3-219ENST00000597636 LGALS16A8MUM7 142 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 HNRNPH1P31943 449 aaKnown RBP17.39■□□□□ 0.37
IRF3-219ENST00000597636 PHKA1P46020 1223 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 CCDC70Q6NSX1 233 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 SH3GL2Q99962 352 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 RCCD1A6NED2 376 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 GOLGA8KD6RF30 607 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 GNGT1P63211 74 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 C2orf54Q08AI8 447 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 PKN1Q16512 942 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 DDB1Q16531 1140 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 MEA1Q16626 185 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
IRF3-219ENST00000597636 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
IRF3-219ENST00000597636 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
IRF3-219ENST00000597636 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 KCNQ4P56696 695 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 PTGDRQ13258 359 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 SND1Q7KZF4 910 aaKnown RBP eCLIP17.38■□□□□ 0.37
IRF3-219ENST00000597636 ZNF507Q8TCN5 953 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 RMND1Q9NWS8 449 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 CYLC1P35663 651 aaPredicted RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 PRCPP42785 496 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 ATP2C1P98194 919 aaPredicted RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 VGLL2Q8N8G2 317 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 JADE2Q9NQC1 790 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 CNNM1Q9NRU3 951 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 UQCRFS1P1P0C7P4 283 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 IDEP14735 1019 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 INPP5BP32019 993 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 GSCP56915 257 aaPredicted RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 MMGT1Q8N4V1 131 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 MAGEB6Q8N7X4 407 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
IRF3-219ENST00000597636 RABEP2Q9H5N1 569 aa17.38■□□□□ 0.37
IRF3-219ENST00000597636 OPA1O60313 960 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 RPN1P04843 607 aaKnown RBP17.37■□□□□ 0.37
IRF3-219ENST00000597636 ITGA6P23229 1130 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
IRF3-219ENST00000597636 FBXW10Q5XX13 1052 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 AHDC1Q5TGY3 1603 aaPredicted RBP17.37■□□□□ 0.37
IRF3-219ENST00000597636 PRKAB2O43741 272 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 PRDM1O75626 825 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 USP8P40818 1118 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 TDO2P48775 406 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 PPP2R5BQ15173 497 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 KCNV1Q6PIU1 500 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 RUBCNQ92622 972 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 PURBQ96QR8 312 aaKnown RBP17.37■□□□□ 0.37
IRF3-219ENST00000597636 HINFPQ9BQA5 517 aa17.37■□□□□ 0.37
IRF3-219ENST00000597636 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 KCNQ2O43526 872 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 PDE8BO95263 885 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 EEF1GP26641 437 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 NACAP1Q9BZK3 213 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 DUSP10Q9Y6W6 482 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 PDS5AQ29RF7 1337 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 EPB41P11171 864 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 MNAT1P51948 309 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 MAP3K12Q12852 859 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 CREG2Q8IUH2 290 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 CCDC170Q8IYT3 715 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 HDAC7Q8WUI4 952 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 TNFRSF25Q93038 417 aa17.36■□□□□ 0.37
IRF3-219ENST00000597636 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
IRF3-219ENST00000597636 GREM2Q9H772 168 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms