RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 VWA5AO00534 786 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 GOLGA8HP0CJ92 632 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 FDX1P10109 184 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 KIF5BP33176 963 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 SP3Q02447 781 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
VRK3-213ENST00000597215 MYL10Q9BUA6 226 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 RBPJLQ9UBG7 517 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
VRK3-213ENST00000597215 CTDP1Q9Y5B0 961 aaPredicted RBP16.75■□□□□ 0.27
VRK3-213ENST00000597215 ZBTB43O43298 467 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 FKTNO75072 461 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 ZBED4O75132 1171 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 SLC16A2P36021 539 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 RCAN1P53805 252 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 ERVK-9P63128 1117 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 ERVK-24P63145 666 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 TXNRD2Q9NNW7 524 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 PRR12Q9ULL5 1215 aa16.74■□□□□ 0.27
VRK3-213ENST00000597215 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
VRK3-213ENST00000597215 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
VRK3-213ENST00000597215 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 CNMDO75829 334 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 NEK4P51957 841 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 CCNA1P78396 465 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
VRK3-213ENST00000597215 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 ZNF296Q8WUU4 475 aaPredicted RBP16.73■□□□□ 0.27
VRK3-213ENST00000597215 ALDH8A1Q9H2A2 487 aaPredicted RBP16.73■□□□□ 0.27
VRK3-213ENST00000597215 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
VRK3-213ENST00000597215 GOLGA8BA8MQT2 603 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 RXRAP19793 462 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 GNAQP50148 359 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 LBX1P52954 281 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
VRK3-213ENST00000597215 KIF22Q14807 665 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 FANCBQ8NB91 859 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 REPS2Q8NFH8 660 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 KIF2CQ99661 725 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 SPATC1LQ9H0A9 340 aa16.72■□□□□ 0.27
VRK3-213ENST00000597215 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
VRK3-213ENST00000597215 PEX10O60683 326 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
VRK3-213ENST00000597215 OAZ1P54368 228 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 EVCP57679 992 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 PLS1Q14651 629 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 RABEP1Q15276 862 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 RTN1Q16799 776 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 RANBP17Q9H2T7 1088 aaKnown RBP16.71■□□□□ 0.27
VRK3-213ENST00000597215 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
VRK3-213ENST00000597215 ZNF214Q9UL59 606 aaPredicted RBP16.71■□□□□ 0.27
VRK3-213ENST00000597215 MGAMO43451 1857 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
VRK3-213ENST00000597215 NID2Q14112 1375 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 COPB2P35606 906 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 STAT3P40763 770 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 AK2P54819 239 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 PPP2R5BQ15173 497 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 Q3C1V9 767 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
VRK3-213ENST00000597215 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 ZNF274Q96GC6 653 aaPredicted RBP16.7■□□□□ 0.26
VRK3-213ENST00000597215 TEX13BQ9BXU2 312 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
VRK3-213ENST00000597215 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 SLC25A27O95847 323 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 MAPK4P31152 587 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 FCGRTP55899 365 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 CCDC174Q6PII3 467 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
VRK3-213ENST00000597215 RAVER2Q9HCJ3 691 aaKnown RBP16.69■□□□□ 0.26
VRK3-213ENST00000597215 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
VRK3-213ENST00000597215 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms