RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 hCG_1642624A0A1W2PR95 340 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 SLC34A2O95436 690 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 DSG3P32926 999 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 KIF5BP33176 963 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 NOVP48745 357 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 STAT2P52630 851 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 GRM4Q14833 912 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 ANKRD1Q15327 319 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 ASPRV1Q53RT3 343 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 APOA5Q6Q788 366 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
ZNF548-206ENST00000597047 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 MTA3Q9BTC8 594 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 SLKQ9H2G2 1235 aaPredicted RBP10.83□□□□□ -0.68
ZNF548-206ENST00000597047 NCOA5Q9HCD5 579 aaKnown RBP10.83□□□□□ -0.68
ZNF548-206ENST00000597047 MAD2L2Q9UI95 211 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 PRR12Q9ULL5 1215 aa10.83□□□□□ -0.68
ZNF548-206ENST00000597047 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 CPLX1O14810 134 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 CA12O43570 354 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 DDAH1O94760 285 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 PLEKHA8P1O95397 391 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 PDIA3P30101 505 aaKnown RBP10.82□□□□□ -0.68
ZNF548-206ENST00000597047 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
ZNF548-206ENST00000597047 ADD1P35611 737 aaKnown RBP10.82□□□□□ -0.68
ZNF548-206ENST00000597047 TROAPQ12815 778 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
ZNF548-206ENST00000597047 SGMS1Q86VZ5 419 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
ZNF548-206ENST00000597047 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 TPCN1Q9ULQ1 816 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 SYNPO2Q9UMS6 1093 aa10.82□□□□□ -0.68
ZNF548-206ENST00000597047 PCNTO95613 3336 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 TAL1P17542 331 aaPredicted RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 CDC27P30260 824 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 Q3C1V9 767 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 USH1GQ495M9 461 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 ADGRF4Q8IZF3 695 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 SRBD1Q8N5C6 995 aaKnown RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 HOMER2Q9NSB8 354 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 RBM28Q9NW13 759 aaKnown RBP10.81□□□□□ -0.68
ZNF548-206ENST00000597047 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
ZNF548-206ENST00000597047 VWA5AO00534 786 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 TLR2O60603 784 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 LARGE1O95461 756 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 SNHG28P0DPA3 235 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 ALAS1P13196 640 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 GNAQP50148 359 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
ZNF548-206ENST00000597047 NBPF11Q86T75 865 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 GPRC5AQ8NFJ5 357 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 PHKBQ93100 1093 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 ZNF274Q96GC6 653 aaPredicted RBP10.8□□□□□ -0.68
ZNF548-206ENST00000597047 AGBL1Q96MI9 1066 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 PIGSQ96S52 555 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 TXNRD2Q9NNW7 524 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 WBP1LQ9NX94 342 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 BTBD7Q9P203 1132 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 RBPJLQ9UBG7 517 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
ZNF548-206ENST00000597047 BAZ2BQ9UIF8 2168 aaKnown RBP10.8□□□□□ -0.68
ZNF548-206ENST00000597047 COL11A1P12107 1806 aaPredicted RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 FOXN1O15353 648 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CD2BP2O95400 341 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 STAT3P40763 770 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 GCLCP48506 637 aaPredicted RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 FOSBP53539 338 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 SSRP1Q08945 709 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 KIF22Q14807 665 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 TMEM132BQ14DG7 1078 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 ME3Q16798 604 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 SNRNP48Q6IEG0 339 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CPLX2Q6PUV4 134 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 TMTC3Q6ZXV5 915 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CD99L2Q8TCZ2 262 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 RRP36Q96EU6 259 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 AGXT2Q9BYV1 514 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 JMJD4Q9H9V9 463 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 ZCCHC17Q9NP64 241 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 FOXD4L1Q9NU39 408 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 SEC63Q9UGP8 760 aaKnown RBP10.79□□□□□ -0.68
ZNF548-206ENST00000597047 CCPG1Q9ULG6 757 aa10.79□□□□□ -0.68
ZNF548-206ENST00000597047 HPS5Q9UPZ3 1129 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms