RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
LIG1-212ENST00000596549 MAML3Q96JK9 1138 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 C11orf49Q9H6J7 331 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 DDX20Q9UHI6 824 aaKnown RBP15.49■□□□□ 0.07
LIG1-212ENST00000596549 COLQQ9Y215 455 aaPredicted RBP15.49■□□□□ 0.07
LIG1-212ENST00000596549 RIPK3Q9Y572 518 aa15.49■□□□□ 0.07
LIG1-212ENST00000596549 PGK2P07205 417 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 FCER1AP12319 257 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
LIG1-212ENST00000596549 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 MMP19Q99542 508 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 TEX13BQ9BXU2 312 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 IL25Q9H293 177 aa15.48■□□□□ 0.07
LIG1-212ENST00000596549 ATP2A1O14983 1001 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 CEP290O15078 2479 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 BMP3P12645 472 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 GSPT1P15170 499 aaKnown RBP15.47■□□□□ 0.07
LIG1-212ENST00000596549 HAND2P61296 217 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 ZNF792Q3KQV3 632 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
LIG1-212ENST00000596549 KIFC2Q96AC6 838 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 CHMP4CQ96CF2 233 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 GMCL1Q96IK5 515 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 PRO3102Q9H379 93 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 FEM1BQ9UK73 627 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 STX8Q9UNK0 236 aa15.47■□□□□ 0.07
LIG1-212ENST00000596549 NEDD4P46934 1319 aa15.46■□□□□ 0.07
LIG1-212ENST00000596549 EVI5O60447 810 aa15.46■□□□□ 0.07
LIG1-212ENST00000596549 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
LIG1-212ENST00000596549 CNGA1P29973 690 aa15.46■□□□□ 0.07
LIG1-212ENST00000596549 COPB2P35606 906 aa15.46■□□□□ 0.07
LIG1-212ENST00000596549 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
LIG1-212ENST00000596549 CPXCR1Q8N123 301 aa15.46■□□□□ 0.07
LIG1-212ENST00000596549 RAVER2Q9HCJ3 691 aaKnown RBP15.46■□□□□ 0.07
LIG1-212ENST00000596549 ZNF536O15090 1300 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 MYH6P13533 1939 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 MSCO60682 206 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 STAT2P52630 851 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 KCTD2Q14681 263 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 RRP12Q5JTH9 1297 aaKnown RBP15.45■□□□□ 0.06
LIG1-212ENST00000596549 PRAMEF19Q5SWL8 479 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 ANO1Q5XXA6 986 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 KCTD1Q719H9 257 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.45■□□□□ 0.06
LIG1-212ENST00000596549 C7orf61Q8IZ16 206 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 STAG1Q8WVM7 1258 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 FGD4Q96M96 766 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 DIAPH3Q9NSV4 1193 aa15.45■□□□□ 0.06
LIG1-212ENST00000596549 DNAJC25-GNG10A0A024R161 153 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 TMEM232C9JQI7 657 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 SEPT4O43236 478 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 MCCP23508 829 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 SLC1A4P43007 532 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 TTC22Q5TAA0 569 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 SLC5A4Q9NY91 659 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 RBM27Q9P2N5 1060 aaKnown RBP15.44■□□□□ 0.06
LIG1-212ENST00000596549 DIS3Q9Y2L1 958 aaKnown RBP15.44■□□□□ 0.06
LIG1-212ENST00000596549 NR2E3Q9Y5X4 410 aa15.44■□□□□ 0.06
LIG1-212ENST00000596549 ZBED4O75132 1171 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
LIG1-212ENST00000596549 OAZ1P54368 228 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 LRRC26Q2I0M4 334 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 AKNAD1Q5T1N1 836 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 RCSD1Q6JBY9 416 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 TINF2Q9BSI4 451 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
LIG1-212ENST00000596549 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
LIG1-212ENST00000596549 RANBP2P49792 3224 aaKnown RBP15.43■□□□□ 0.06
LIG1-212ENST00000596549 DNM1LO00429 736 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 PLA2G6O60733 806 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
LIG1-212ENST00000596549 SLC4A3P48751 1232 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
LIG1-212ENST00000596549 FAM160B2Q86V87 743 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 TMEM47Q9BQJ4 181 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 TCP11L1Q9NUJ3 509 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
LIG1-212ENST00000596549 ZMYND8Q9ULU4 1186 aaPredicted RBP15.42■□□□□ 0.06
LIG1-212ENST00000596549 DNAH12Q6ZR08 3092 aa15.41■□□□□ 0.06
LIG1-212ENST00000596549 ZNF865P0CJ78 1059 aaPredicted RBP15.41■□□□□ 0.06
LIG1-212ENST00000596549 SNAP25P60880 206 aa15.41■□□□□ 0.06
LIG1-212ENST00000596549 GJC2Q5T442 439 aaPredicted RBP15.41■□□□□ 0.06
LIG1-212ENST00000596549 LENG1Q96BZ8 264 aaPredicted RBP15.41■□□□□ 0.06
LIG1-212ENST00000596549 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
LIG1-212ENST00000596549 DSCC1Q9BVC3 393 aa15.41■□□□□ 0.06
LIG1-212ENST00000596549 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
LIG1-212ENST00000596549 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
LIG1-212ENST00000596549 HIP1O00291 1037 aa15.4■□□□□ 0.06
LIG1-212ENST00000596549 FDX1P10109 184 aa15.4■□□□□ 0.06
LIG1-212ENST00000596549 PDHBP11177 359 aa15.4■□□□□ 0.06
LIG1-212ENST00000596549 TOP1P11387 765 aaKnown RBP15.4■□□□□ 0.06
LIG1-212ENST00000596549 PCP11498 1178 aaKnown RBP15.4■□□□□ 0.06
LIG1-212ENST00000596549 SYN1P17600 705 aa15.4■□□□□ 0.06
LIG1-212ENST00000596549 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
LIG1-212ENST00000596549 CCDC96Q2M329 555 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms