RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 MAPK4P31152 587 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
LIG1-208ENST00000595758 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
LIG1-208ENST00000595758 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 BTNL9Q6UXG8 535 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 CATIPQ7Z7H3 387 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 SPATC1LQ9H0A9 340 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 PRR12Q9ULL5 1215 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
LIG1-208ENST00000595758 GOLGA8HP0CJ92 632 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 SLC16A2P36021 539 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 STAT3P40763 770 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 LIFRP42702 1097 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 SYDE2Q5VT97 1194 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 REPS2Q8NFH8 660 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 COA7Q96BR5 231 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
LIG1-208ENST00000595758 PORCNQ9H237 461 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 SLC38A10Q9HBR0 1119 aa16.78■□□□□ 0.28
LIG1-208ENST00000595758 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
LIG1-208ENST00000595758 CCDC69A6NI79 296 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 CPA1P15085 419 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
LIG1-208ENST00000595758 WDR78Q5VTH9 848 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 TEX13BQ9BXU2 312 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 MCOLN1Q9GZU1 580 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 SRRDQ9UH36 339 aa16.77■□□□□ 0.28
LIG1-208ENST00000595758 ZNF214Q9UL59 606 aaPredicted RBP16.77■□□□□ 0.28
LIG1-208ENST00000595758 PARP14Q460N5 1801 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 SLC25A27O95847 323 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 ERCC3P19447 782 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 OAZ1P54368 228 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 PRMT2P55345 433 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 FGD1P98174 961 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 TROAPQ12815 778 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 GRM4Q14833 912 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 PLEKHH3Q7Z736 793 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 ZNF654Q8IZM8 581 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 CPXCR1Q8N123 301 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 MROH8Q9H579 483 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
LIG1-208ENST00000595758 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
LIG1-208ENST00000595758 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 DDAH1O94760 285 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 COPB2P35606 906 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 ANAPC15P60006 121 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 SNAP25P60880 206 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 PRKCZQ05513 592 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
LIG1-208ENST00000595758 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
LIG1-208ENST00000595758 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 SGMS1Q86VZ5 419 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 RIOX2Q8IUF8 465 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 RAVER2Q9HCJ3 691 aaKnown RBP16.75■□□□□ 0.27
LIG1-208ENST00000595758 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 MAD2L2Q9UI95 211 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 SLC12A7Q9Y666 1083 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 A0A0G2JMZ2 1700 aa16.75■□□□□ 0.27
LIG1-208ENST00000595758 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 SLC4A3P48751 1232 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 FLT3LGP49771 235 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 CCDC174Q6PII3 467 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 TNS4Q8IZW8 715 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 STAG2Q8N3U4 1231 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 RANBP17Q9H2T7 1088 aaKnown RBP16.74■□□□□ 0.27
LIG1-208ENST00000595758 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 GABRQQ9UN88 632 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 ZSWIM8A7E2V4 1837 aa16.74■□□□□ 0.27
LIG1-208ENST00000595758 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
LIG1-208ENST00000595758 CALM1P0DP23 149 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 CALM2P0DP24 149 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 CALM3P0DP25 149 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 KIF5BP33176 963 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 Q6ZUG5 572 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
LIG1-208ENST00000595758 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 AGBL1Q96MI9 1066 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 NUDT12Q9BQG2 462 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 PTCH2Q9Y6C5 1203 aa16.73■□□□□ 0.27
LIG1-208ENST00000595758 ZNF536O15090 1300 aa16.72■□□□□ 0.27
LIG1-208ENST00000595758 MGAMO43451 1857 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms