RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ADAM21Q9UKJ8 722 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
ZNF541-205ENST00000595558 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
ZNF541-205ENST00000595558 NAA15Q9BXJ9 866 aaKnown RBP17.3■□□□□ 0.36
ZNF541-205ENST00000595558 GOLGA8HP0CJ92 632 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 XBP1P17861 261 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 FILIP1LQ4L180 1135 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 PDXDC2PQ6P474 469 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
ZNF541-205ENST00000595558 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 NUP88Q99567 741 aaPredicted RBP17.3■□□□□ 0.36
ZNF541-205ENST00000595558 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
ZNF541-205ENST00000595558 CNTNAP4Q9C0A0 1308 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 CTAGE9A4FU28 777 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 TRIM49BA6NDI0 452 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 RCAN1P53805 252 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 VSNL1P62760 191 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
ZNF541-205ENST00000595558 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 TGFBRAP1Q8WUH2 860 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 MTA3Q9BTC8 594 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
ZNF541-205ENST00000595558 IQCA1Q86XH1 822 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
ZNF541-205ENST00000595558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
ZNF541-205ENST00000595558 TFAP4Q01664 338 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 BRD3Q15059 726 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 NELFBQ8WX92 580 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 MYH8P13535 1937 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 LMAN1P49257 510 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 TMTC3Q6ZXV5 915 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
ZNF541-205ENST00000595558 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
ZNF541-205ENST00000595558 REXO2Q9Y3B8 237 aaKnown RBP17.28■□□□□ 0.36
ZNF541-205ENST00000595558 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 KRT9P35527 623 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
ZNF541-205ENST00000595558 RAD51AP2Q09MP3 1159 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 TCP11X2Q5H9J9 407 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 CEP112Q8N8E3 955 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 VPS18Q9P253 973 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 LIMA1Q9UHB6 759 aaKnown RBP17.27■□□□□ 0.36
ZNF541-205ENST00000595558 DUOX1Q9NRD9 1551 aa17.27■□□□□ 0.36
ZNF541-205ENST00000595558 KCNJ18B7U540 433 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 TULP2O00295 520 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 ENC1O14682 589 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 FECHP22830 423 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 PRCPP42785 496 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 KCNJ12Q14500 433 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 TYW1BQ6NUM6 668 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 MSANTD4Q8NCY6 345 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.35
ZNF541-205ENST00000595558 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.35
ZNF541-205ENST00000595558 RAB21Q9UL25 225 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 L1RE1Q9UN81 338 aa17.27■□□□□ 0.35
ZNF541-205ENST00000595558 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 USP5P45974 858 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 GPSM2P81274 684 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 PAK1Q13153 545 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 IRF2BP1Q8IU81 584 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 IQUBQ8NA54 791 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 PLIN2Q99541 437 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 NAPGQ99747 312 aaPredicted RBP17.26■□□□□ 0.35
ZNF541-205ENST00000595558 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 GUCA1BQ9UMX6 200 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
ZNF541-205ENST00000595558 SEMA3EO15041 775 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 NLRP5P59047 1200 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 CT47A1Q5JQC4 288 aaPredicted RBP17.26■□□□□ 0.35
ZNF541-205ENST00000595558 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
ZNF541-205ENST00000595558 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
ZNF541-205ENST00000595558 UBXN1Q04323 297 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 ZSCAN26Q16670 478 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 LCMT1Q9UIC8 334 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 RWDD2AQ9UIY3 292 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
ZNF541-205ENST00000595558 PHACTR2O75167 634 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 HNRNPLLQ8WVV9 542 aaKnown RBP17.25■□□□□ 0.35
ZNF541-205ENST00000595558 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 STX8Q9UNK0 236 aa17.25■□□□□ 0.35
ZNF541-205ENST00000595558 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
ZNF541-205ENST00000595558 TTC26A0AVF1 554 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms