RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 IGHA2P01877 340 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 HOXC6P09630 235 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 STAT3P40763 770 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 UBXN2AP68543 259 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 MAP3K21Q5TCX8 1036 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 MROH8Q9H579 483 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-206ENST00000595523 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 PLA2G6O60733 806 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 COBLO75128 1261 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 SLC25A27O95847 323 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 GJB1P08034 283 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 PDHBP11177 359 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 ADORA2AP29274 412 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 NT5C2P49902 561 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 STAT2P52630 851 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 TTC14Q96N46 770 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 PAK6Q9NQU5 681 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 RBM8AQ9Y5S9 174 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-206ENST00000595523 ZNF536O15090 1300 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 STRNO43815 780 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 GJA8P48165 433 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 FAM160B2Q86V87 743 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 ABRAQ8N0Z2 381 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 ZSCAN10Q96SZ4 725 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 KRT23Q9C075 422 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.349e-6■■■■■ 32.4
SHKBP1-206ENST00000595523 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 RAVER2Q9HCJ3 691 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 PRR12Q9ULL5 1215 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 LRRC37A2A6NM11 1700 aa12.93□□□□□ -0.34
SHKBP1-206ENST00000595523 TNKSO95271 1327 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 E7EWF7 191 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 ZBED4O75132 1171 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 SLC16A2P36021 539 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 OAZ1P54368 228 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 SNAP25P60880 206 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 SEC23AQ15436 765 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 CHURC1Q8WUH1 139 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 PPP4R2Q9NY27 417 aa12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-206ENST00000595523 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 CDC45O75419 566 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 PGK2P07205 417 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 FCER1AP12319 257 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 TAL1P17542 331 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 ANTXR2P58335 489 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 UBE2Q1Q7Z7E8 422 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 PNMA1Q8ND90 353 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 AGBL1Q96MI9 1066 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 DEFB118Q96PH6 123 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 MMP19Q99542 508 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
SHKBP1-206ENST00000595523 SLC27A2O14975 620 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 SGPL1O95470 568 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 FDX1P10109 184 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 CYP2C19P33261 490 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 COPB2P35606 906 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms