RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 EIF3CLB5ME19 914 aaKnown RBP17.45■□□□□ 0.38
PNKP-204ENST00000594661 MMP1P03956 469 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 ZNF165P49910 485 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 PKN1Q16512 942 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 AOC3Q16853 763 aa17.45■□□□□ 0.38
PNKP-204ENST00000594661 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
PNKP-204ENST00000594661 EIF3CQ99613 913 aaKnown RBP17.45■□□□□ 0.38
PNKP-204ENST00000594661 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
PNKP-204ENST00000594661 WDHD1O75717 1129 aaPredicted RBP17.44■□□□□ 0.38
PNKP-204ENST00000594661 KCNJ6P48051 423 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 NT5C2P49902 561 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 CORO7P57737 925 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 FMR1NBQ8N0W7 255 aaPredicted RBP17.44■□□□□ 0.38
PNKP-204ENST00000594661 CNTNAP5Q8WYK1 1306 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 LMAN1P49257 510 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 NDUFA8P51970 172 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 MMS22LQ6ZRQ5 1243 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
PNKP-204ENST00000594661 CTCFLQ8NI51 663 aaPredicted RBP17.44■□□□□ 0.38
PNKP-204ENST00000594661 SRRTQ9BXP5 876 aaKnown RBP17.44■□□□□ 0.38
PNKP-204ENST00000594661 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
PNKP-204ENST00000594661 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 C21orf2O43822 256 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 TADA3O75528 432 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 SEC31AO94979 1220 aaKnown RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 DACT2Q5SW24 774 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 LEKR1Q6ZMV7 388 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 ANKS1AQ92625 1134 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 TCP11L1Q9NUJ3 509 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
PNKP-204ENST00000594661 V9GY48 417 aaPredicted RBP17.43■□□□□ 0.38
PNKP-204ENST00000594661 STX1AQ16623 288 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 STRIP1Q5VSL9 837 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 KIAA0825Q8IV33 1275 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 PHLPP2Q6ZVD8 1323 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 EFCAB8A8MWE9 144 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 SOCS7O14512 581 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 CRKP46108 304 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 SLC39A14Q15043 492 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 EGFL6Q8IUX8 553 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 PPP1R13BQ96KQ4 1090 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 PCDHAC2Q9Y5I4 1007 aa17.42■□□□□ 0.38
PNKP-204ENST00000594661 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
PNKP-204ENST00000594661 GSDMDP57764 484 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 IQCB1Q15051 598 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
PNKP-204ENST00000594661 RPAINQ86UA6 219 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 OXER1Q8TDS5 423 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 SUFUQ9UMX1 484 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 NR5A1Q13285 461 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 E4F1Q66K89 784 aaPredicted RBP17.41■□□□□ 0.38
PNKP-204ENST00000594661 C11orf57Q6ZUT1 292 aaPredicted RBP17.41■□□□□ 0.38
PNKP-204ENST00000594661 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 STX8Q9UNK0 236 aa17.41■□□□□ 0.38
PNKP-204ENST00000594661 FKBP1AP62942 108 aaKnown RBP17.4■□□□□ 0.38
PNKP-204ENST00000594661 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
PNKP-204ENST00000594661 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
PNKP-204ENST00000594661 NEDD1Q8NHV4 660 aa17.4■□□□□ 0.38
PNKP-204ENST00000594661 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
PNKP-204ENST00000594661 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
PNKP-204ENST00000594661 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
PNKP-204ENST00000594661 CMA1P23946 247 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 GABPAQ06546 454 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 NFIAQ12857 509 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 PTPAQ15257 358 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 TTLL6Q8N841 843 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 ZDHHC15Q96MV8 337 aa17.39■□□□□ 0.38
PNKP-204ENST00000594661 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
PNKP-204ENST00000594661 A0A087WWV3 80 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 PPIP5K2O43314 1243 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 DPEP1P16444 411 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 KCNA3P22001 575 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 KIF5BP33176 963 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 GRM4Q14833 912 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 E2F4Q16254 413 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 JMYQ8N9B5 988 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 FUT8Q9BYC5 575 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms