RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
VRK3-207ENST00000594092 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 KRT2P35908 639 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 NLRP5P59047 1200 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
VRK3-207ENST00000594092 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
VRK3-207ENST00000594092 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.39
VRK3-207ENST00000594092 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 USP2O75604 605 aaPredicted RBP17.47■□□□□ 0.39
VRK3-207ENST00000594092 PRKG1Q13976 671 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 BTNL9Q6UXG8 535 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 FAM177A1Q8N128 213 aaPredicted RBP17.47■□□□□ 0.39
VRK3-207ENST00000594092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.47■□□□□ 0.39
VRK3-207ENST00000594092 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
VRK3-207ENST00000594092 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
VRK3-207ENST00000594092 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 PTPRAP18433 802 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
VRK3-207ENST00000594092 CCDC148Q8NFR7 591 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 SPATA32Q96LK8 384 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 FEZ1Q99689 392 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 PICK1Q9NRD5 415 aa17.46■□□□□ 0.39
VRK3-207ENST00000594092 ELP1O95163 1332 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 ZBTB5O15062 677 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 GADD45BO75293 160 aaPredicted RBP17.45■□□□□ 0.38
VRK3-207ENST00000594092 CALML3P27482 149 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 UBE2HP62256 183 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 CEBPZQ03701 1054 aaKnown RBP17.45■□□□□ 0.38
VRK3-207ENST00000594092 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
VRK3-207ENST00000594092 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 ADAMTS3O15072 1205 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 NAPAP54920 295 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
VRK3-207ENST00000594092 SYDE2Q5VT97 1194 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
VRK3-207ENST00000594092 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
VRK3-207ENST00000594092 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 PPP1R12BO60237 982 aaPredicted RBP17.44■□□□□ 0.38
VRK3-207ENST00000594092 PPP1R11O60927 126 aaPredicted RBP17.44■□□□□ 0.38
VRK3-207ENST00000594092 BLIDQ8IZY5 108 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 DAGLBQ8NCG7 672 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 ZMYND12Q9H0C1 365 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
VRK3-207ENST00000594092 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 STAT2P52630 851 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 CDC37Q16543 378 aaPredicted RBP17.43■□□□□ 0.38
VRK3-207ENST00000594092 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
VRK3-207ENST00000594092 GALNT17Q6IS24 598 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
VRK3-207ENST00000594092 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
VRK3-207ENST00000594092 COA7Q96BR5 231 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 AS3MTQ9HBK9 375 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 POLR3EQ9NVU0 708 aa17.43■□□□□ 0.38
VRK3-207ENST00000594092 PLA2G6O60733 806 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
VRK3-207ENST00000594092 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
VRK3-207ENST00000594092 SPP2Q13103 211 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 MTMR2Q13614 643 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 LPAR1Q92633 364 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 ZHX2Q9Y6X8 837 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 PAPPA2Q9BXP8 1791 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 ESYT2A0FGR8 921 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 M0R2N6 131 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 NF2P35240 595 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 VGLL4Q14135 290 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
VRK3-207ENST00000594092 ANO1Q5XXA6 986 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 LINC00301Q8NCQ3 95 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 CHURC1Q8WUH1 139 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 PRR12Q9ULL5 1215 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
VRK3-207ENST00000594092 WDR46O15213 610 aaKnown RBP17.41■□□□□ 0.38
VRK3-207ENST00000594092 YEATS4O95619 227 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 IREB2P48200 963 aaKnown RBP17.41■□□□□ 0.38
VRK3-207ENST00000594092 USP14P54578 494 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 BACE1P56817 501 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 DGKZQ13574 1117 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 SYAP1Q96A49 352 aaPredicted RBP17.41■□□□□ 0.38
VRK3-207ENST00000594092 RRAGCQ9HB90 399 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 C6orf50Q9HD87 102 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms