RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 BMP1P13497 986 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 TRIM27P14373 513 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 CDK7P50613 346 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 KCNQ1P51787 676 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 POLA2Q14181 598 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 TMED8Q6PL24 325 aaPredicted RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 HERVK_113Q902F9 699 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 CRNKL1Q9BZJ0 848 aaKnown RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 CCDC8Q9H0W5 538 aaPredicted RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 MTIF3Q9H2K0 278 aaKnown RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 ZNF214Q9UL59 606 aaPredicted RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 FAM184BQ9ULE4 1060 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 ADAMTS5Q9UNA0 930 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 TNNQ9UQP3 1299 aa10.29□□□□□ -0.76
SMG9-202ENST00000594081 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
SMG9-202ENST00000594081 COL4A4P53420 1690 aaPredicted RBP10.28□□□□□ -0.76
SMG9-202ENST00000594081 ARVCFO00192 962 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 VWA5AO00534 786 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 TLR3O15455 904 aaKnown RBP10.28□□□□□ -0.76
SMG9-202ENST00000594081 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
SMG9-202ENST00000594081 ASGR1P07306 291 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 CYP2D6P10635 497 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 AKR1B1P15121 316 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 COPB2P35606 906 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 STAT3P40763 770 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 SIAH1Q8IUQ4 282 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 MSL3Q8N5Y2 521 aaKnown RBP10.28□□□□□ -0.76
SMG9-202ENST00000594081 REPS2Q8NFH8 660 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 SSH3Q8TE77 659 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 SDR42E1Q8WUS8 393 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 IL23AQ9NPF7 189 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 PPP1R9AQ9ULJ8 1098 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
SMG9-202ENST00000594081 REV3LO60673 3130 aa10.28□□□□□ -0.76
SMG9-202ENST00000594081 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 CYP2C18P33260 490 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 RABGGTBP53611 331 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 AAK1Q2M2I8 961 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 OTOP2Q7RTS6 562 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 EAF2Q96CJ1 260 aaPredicted RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 DYNLL2Q96FJ2 89 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 LRFN3Q9BTN0 628 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
SMG9-202ENST00000594081 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
SMG9-202ENST00000594081 ERC2O15083 957 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 BCAR3O75815 825 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 CD4P01730 458 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 FGBP02675 491 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 PDE6AP16499 860 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 GJA9P57773 515 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 FAM83BQ5T0W9 1011 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 MAMDC4Q6UXC1 1216 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 LCORLQ8N3X6 602 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 TEX13BQ9BXU2 312 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 HIPK3Q9H422 1215 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 EPHX3Q9H6B9 360 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 SPC25Q9HBM1 224 aa10.26□□□□□ -0.77
SMG9-202ENST00000594081 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
SMG9-202ENST00000594081 TANC1Q9C0D5 1861 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 PRRC2BQ5JSZ5 2229 aaKnown RBP10.25□□□□□ -0.77
SMG9-202ENST00000594081 DNAJC25-GNG10A0A024R161 153 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 RAD21O60216 631 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
SMG9-202ENST00000594081 MYOGP15173 224 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 ACVR2BQ13705 512 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 GNASQ5JWF2 1037 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 TMEM31Q5JXX7 168 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 SLC9C2Q5TAH2 1124 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 SNRNP48Q6IEG0 339 aaKnown RBP10.25□□□□□ -0.77
SMG9-202ENST00000594081 DDX11Q96FC9 970 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 NOP58Q9Y2X3 529 aaKnown RBP10.25□□□□□ -0.77
SMG9-202ENST00000594081 ZNF532Q9HCE3 1301 aa10.25□□□□□ -0.77
SMG9-202ENST00000594081 PIEZO1Q92508 2521 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 IPO8O15397 1037 aaKnown RBP10.24□□□□□ -0.77
SMG9-202ENST00000594081 CCL23P55773 120 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 ATP8B2P98198 1209 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 TTF1Q15361 905 aaPredicted RBP10.24□□□□□ -0.77
SMG9-202ENST00000594081 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
SMG9-202ENST00000594081 AACSQ86V21 672 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 FRAT1Q92837 279 aaPredicted RBP10.24□□□□□ -0.77
SMG9-202ENST00000594081 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 FGD4Q96M96 766 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 SLF1Q9BQI6 1058 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms