RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 HDLBPQ00341 1268 aaKnown RBP16.22■□□□□ 0.19
RANBP3-229ENST00000592771 GRIN1Q05586 938 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 DCAF8Q5TAQ9 597 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 NT5DC1Q5TFE4 455 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 CDC42EP5Q6NZY7 148 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 DBNDD1Q9H9R9 158 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 USP40Q9NVE5 1235 aa16.22■□□□□ 0.19
RANBP3-229ENST00000592771 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 GOLGA6L9A6NEM1 432 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 NLRP5P59047 1200 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 ETF1P62495 437 aaKnown RBP16.21■□□□□ 0.19
RANBP3-229ENST00000592771 CC2D2BQ6DHV5 1058 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 FAM53CQ9NYF3 392 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 ZSCAN12O43309 604 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 CRKP46108 304 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 SCNN1DP51172 638 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 PICALMQ13492 652 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
RANBP3-229ENST00000592771 METTL16Q86W50 562 aaKnown RBP16.21■□□□□ 0.19
RANBP3-229ENST00000592771 MLKLQ8NB16 471 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 PRDM10Q9NQV6 1147 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 KCNQ5Q9NR82 932 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 SWAP70Q9UH65 585 aa16.21■□□□□ 0.19
RANBP3-229ENST00000592771 WNT7AO00755 349 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 ECE2O60344 883 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
RANBP3-229ENST00000592771 PNOCQ13519 176 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
RANBP3-229ENST00000592771 LONRF3Q496Y0 759 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 DAGLBQ8NCG7 672 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 CCDC34Q96HJ3 373 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 SIPA1L1O43166 1804 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 PSME4Q14997 1843 aa16.2■□□□□ 0.18
RANBP3-229ENST00000592771 M0R2N6 131 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 NAA30Q147X3 362 aaPredicted RBP16.19■□□□□ 0.18
RANBP3-229ENST00000592771 CFAP100Q494V2 611 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 TTC38Q5R3I4 469 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 GALNT17Q6IS24 598 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 FERMT2Q96AC1 680 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 PCDHA5Q9Y5H7 936 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ADAMTS3O15072 1205 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 TPM1P09493 284 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ATP1A3P13637 1013 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ATP2C1P98194 919 aaPredicted RBP16.19■□□□□ 0.18
RANBP3-229ENST00000592771 TYW1BQ6NUM6 668 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
RANBP3-229ENST00000592771 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.183e-8■■■□□ 18.6
RANBP3-229ENST00000592771 EHD4Q9H223 541 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 MTMR4Q9NYA4 1195 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
RANBP3-229ENST00000592771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.19■□□□□ 0.186e-6■□□□□ 9.8
RANBP3-229ENST00000592771 STXBP3O00186 592 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
RANBP3-229ENST00000592771 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
RANBP3-229ENST00000592771 SHMT1P34896 483 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
RANBP3-229ENST00000592771 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 CSRNP2Q9H175 543 aa16.18■□□□□ 0.18
RANBP3-229ENST00000592771 AKR1B1P15121 316 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 H2AFXP16104 143 aaPredicted RBP16.17■□□□□ 0.18
RANBP3-229ENST00000592771 POSTNQ15063 836 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 ELF2Q15723 593 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 STX10O60499 249 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 NFIAQ12857 509 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 TBX2Q13207 712 aaPredicted RBP16.17■□□□□ 0.18
RANBP3-229ENST00000592771 PIK3AP1Q6ZUJ8 805 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 RASGRP2Q7LDG7 609 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 FOXP4Q8IVH2 680 aaPredicted RBP16.17■□□□□ 0.18
RANBP3-229ENST00000592771 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
RANBP3-229ENST00000592771 ACTN4O43707 911 aaKnown RBP16.16■□□□□ 0.18
RANBP3-229ENST00000592771 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
RANBP3-229ENST00000592771 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
RANBP3-229ENST00000592771 PDHBP11177 359 aa16.16■□□□□ 0.18
RANBP3-229ENST00000592771 ERCC5P28715 1186 aaPredicted RBP16.16■□□□□ 0.18
RANBP3-229ENST00000592771 MORC3Q14149 939 aa16.16■□□□□ 0.18
RANBP3-229ENST00000592771 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
RANBP3-229ENST00000592771 ZNF174Q15697 407 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms