RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 VCAM1P19320 739 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 G3BP1Q13283 466 aaKnown RBP eCLIP9.04□□□□□ -0.965e-10■■□□□ 12.5
VAT1-209ENST00000592388 POLA2Q14181 598 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 GORABQ5T7V8 394 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 SPTY2D1Q68D10 685 aaPredicted RBP9.04□□□□□ -0.96
VAT1-209ENST00000592388 CCSAPQ6IQ19 270 aaPredicted RBP9.04□□□□□ -0.96
VAT1-209ENST00000592388 ADGRA1Q86SQ6 560 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 NCAPG2Q86XI2 1143 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
VAT1-209ENST00000592388 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 SPATC1LQ9H0A9 340 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 HIPK3Q9H422 1215 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 TLR7Q9NYK1 1049 aaKnown RBP9.04□□□□□ -0.96
VAT1-209ENST00000592388 RAI14Q9P0K7 980 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 TRANK1O15050 2925 aa9.04□□□□□ -0.96
VAT1-209ENST00000592388 GH2P01242 217 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 ASGR1P07306 291 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 ID4P47928 161 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 OS9Q13438 667 aaPredicted RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 PLS1Q14651 629 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 TNNI3KQ59H18 835 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 TEX11Q8IYF3 940 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 RPUSD2Q8IZ73 545 aaKnown RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 GDPD5Q8WTR4 605 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 ATOH1Q92858 354 aaPredicted RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 SCLYQ96I15 445 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 FPGT-TNNI3KV9GXZ4 949 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 CACNA1HO95180 2353 aa9.03□□□□□ -0.96
VAT1-209ENST00000592388 RIF1Q5UIP0 2472 aaKnown RBP9.03□□□□□ -0.96
VAT1-209ENST00000592388 TECTAO75443 2155 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 H3BQ06 376 aaPredicted RBP9.02□□□□□ -0.97
VAT1-209ENST00000592388 RGS20O76081 388 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 CD4P01730 458 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 PGK2P07205 417 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.97
VAT1-209ENST00000592388 USP14P54578 494 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 SHCBP1Q8NEM2 672 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 ACER1Q8TDN7 264 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 SSH3Q8TE77 659 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 PRRX2Q99811 253 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 WNT8AQ9H1J5 351 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 GINM1Q9NU53 330 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
VAT1-209ENST00000592388 LRP2BPQ9P2M1 347 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 MUTYHQ9UIF7 546 aa9.02□□□□□ -0.97
VAT1-209ENST00000592388 DBNLQ9UJU6 430 aaKnown RBP9.02□□□□□ -0.97
VAT1-209ENST00000592388 COL11A1P12107 1806 aaPredicted RBP9.02□□□□□ -0.97
VAT1-209ENST00000592388 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 SURF6O75683 361 aaKnown RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 UQCRFS1P1P0C7P4 283 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 FCER1AP12319 257 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 ZAP70P43403 619 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 GSTO1P78417 241 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 ATP8B2P98198 1209 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 ZP2Q05996 745 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 ASCL5Q7RTU5 278 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 DEFB128Q7Z7B8 93 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 MAPKAPK5Q8IW41 473 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 PCSK9Q8NBP7 692 aaKnown RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 PBXIP1Q96AQ6 731 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 DHX36Q9H2U1 1008 aaKnown RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 MROH8Q9H579 483 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 PIH1D3Q9NQM4 214 aaKnown RBP9.01□□□□□ -0.97
VAT1-209ENST00000592388 LMCD1Q9NZU5 365 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 MTUS1Q9ULD2 1270 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 FAM186AA6NE01 2351 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 FLT1P17948 1338 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 DMDP11532 3685 aa9.01□□□□□ -0.97
VAT1-209ENST00000592388 ROBO3Q96MS0 1386 aa9□□□□□ -0.97
VAT1-209ENST00000592388 ZNFX1Q9P2E3 1918 aaKnown RBP9□□□□□ -0.97
VAT1-209ENST00000592388 MED19A0JLT2 244 aaPredicted RBP9□□□□□ -0.97
VAT1-209ENST00000592388 KIF28PB7ZC32 967 aa9□□□□□ -0.97
VAT1-209ENST00000592388 LDHCP07864 332 aa9□□□□□ -0.97
VAT1-209ENST00000592388 IRS1P35568 1242 aa9□□□□□ -0.97
VAT1-209ENST00000592388 DYNLL1P63167 89 aaKnown RBP9□□□□□ -0.97
VAT1-209ENST00000592388 COG2Q14746 738 aa9□□□□□ -0.97
VAT1-209ENST00000592388 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
VAT1-209ENST00000592388 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
VAT1-209ENST00000592388 NAA16Q6N069 864 aaPredicted RBP9□□□□□ -0.97
VAT1-209ENST00000592388 SUGP1Q8IWZ8 645 aaKnown RBP9□□□□□ -0.97
VAT1-209ENST00000592388 ABRAQ8N0Z2 381 aa9□□□□□ -0.97
VAT1-209ENST00000592388 TGFBRAP1Q8WUH2 860 aa9□□□□□ -0.97
VAT1-209ENST00000592388 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms