RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 FCGRTP55899 365 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 TROAPQ12815 778 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 PKN2Q16513 984 aaKnown RBP11.37□□□□□ -0.59
TPM4-215ENST00000592138 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 CHST3Q7LGC8 479 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 CTU1Q7Z7A3 348 aaKnown RBP11.37□□□□□ -0.59
TPM4-215ENST00000592138 CATIPQ7Z7H3 387 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 SHCBP1Q8NEM2 672 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 ATG4CQ96DT6 458 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 JAKMIP1Q96N16 626 aaKnown RBP11.37□□□□□ -0.59
TPM4-215ENST00000592138 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 SPATC1LQ9H0A9 340 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 SLC38A10Q9HBR0 1119 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 FBXO28Q9NVF7 368 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 BTBD7Q9P203 1132 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 ZNF214Q9UL59 606 aaPredicted RBP11.37□□□□□ -0.59
TPM4-215ENST00000592138 RLFQ13129 1914 aa11.37□□□□□ -0.59
TPM4-215ENST00000592138 ZBED4O75132 1171 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 SEC24BO95487 1268 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 SLC25A27O95847 323 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
TPM4-215ENST00000592138 CALM1P0DP23 149 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 CALM2P0DP24 149 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 CALM3P0DP25 149 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 CASTP20810 708 aaKnown RBP11.36□□□□□ -0.59
TPM4-215ENST00000592138 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 HOXD10P28358 340 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 PSMC4P43686 418 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
TPM4-215ENST00000592138 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 KCTD1Q719H9 257 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 RUFY3Q7L099 469 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 CD99L2Q8TCZ2 262 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
TPM4-215ENST00000592138 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
TPM4-215ENST00000592138 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 KIF5BP33176 963 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
TPM4-215ENST00000592138 GRM4Q14833 912 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 Q3C1V9 767 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
TPM4-215ENST00000592138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM4-215ENST00000592138 RASGRP2Q7LDG7 609 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 SOCS4Q8WXH5 440 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 TEX13BQ9BXU2 312 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 RANBP17Q9H2T7 1088 aaKnown RBP11.35□□□□□ -0.59
TPM4-215ENST00000592138 MROH8Q9H579 483 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 EFCC1Q9HA90 598 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 CYP46A1Q9Y6A2 500 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 PARP14Q460N5 1801 aa11.35□□□□□ -0.59
TPM4-215ENST00000592138 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
TPM4-215ENST00000592138 NID2Q14112 1375 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 SMARCA1P28370 1054 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 CTGFP29279 349 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 STAT3P40763 770 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 EVCP57679 992 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 CAP1Q01518 475 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 PPP2R5BQ15173 497 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 COA7Q96BR5 231 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 ARHGAP39Q9C0H5 1083 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 PORCNQ9H237 461 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 MTMR7Q9Y216 660 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
TPM4-215ENST00000592138 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
TPM4-215ENST00000592138 KLRF2D3W0D1 207 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 STRNO43815 780 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 ICAM1P05362 532 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 GNAQP50148 359 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 FGD1P98174 961 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 IRF5Q13568 498 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 TKFCQ3LXA3 575 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 TTBK2Q6IQ55 1244 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 FBXO46Q6PJ61 603 aaPredicted RBP11.33□□□□□ -0.6
TPM4-215ENST00000592138 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
TPM4-215ENST00000592138 SYNE3Q6ZMZ3 975 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms