RNA–Protein interactions for RNA: ENST00000591123.5

SAFB2-209, Transcript of scaffold attachment factor B2, human

TSL 5

Gene SAFB2, Length 836 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB2-209	ENST00000591123	HMGCS2	P54868	508 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	MKRN3	Q13064	507 aa	Known RBP	13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	PPP2R5B	Q15173	497 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	IFFO2	Q5TF58	517 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.57	□□□□□ -0.24	3e-6	■□□□□ 10.5
SAFB2-209	ENST00000591123	C8orf76	Q96K31	380 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	PIGS	Q96S52	555 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	EMILIN3	Q9NT22	766 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	ZDHHC9	Q9Y397	364 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	SMCHD1	A6NHR9	2005 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	STK36	Q9NRP7	1315 aa		13.57	□□□□□ -0.24
SAFB2-209	ENST00000591123	LOC285556	D6RIA3	1793 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	DEXI	O95424	95 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	ITGBL1	O95965	494 aa	Predicted RBP	13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	TAL1	P17542	331 aa	Predicted RBP	13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	PKN1	Q16512	942 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	MAP3K11	Q16584	847 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	FERMT3	Q86UX7	667 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	ADGRF4	Q8IZF3	695 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	OPTN	Q96CV9	577 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	GMCL1	Q96IK5	515 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	ZFP91	Q96JP5	570 aa	Predicted RBP	13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	LZTS2	Q9BRK4	669 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	WDR18	Q9BV38	432 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	RNF26	Q9BY78	433 aa	Predicted RBP	13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	FBXO28	Q9NVF7	368 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	VPS54	Q9P1Q0	977 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	MTMR6	Q9Y217	621 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	AFG3L2	Q9Y4W6	797 aa		13.56	□□□□□ -0.24
SAFB2-209	ENST00000591123	YY1	P25490	414 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	BACE1	P56817	501 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	GPATCH4	Q5T3I0	446 aa	Known RBP	13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	SYDE2	Q5VT97	1194 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	CST9	Q5W186	159 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	MCTP1	Q6DN14	999 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	HEATR3	Q7Z4Q2	680 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	C2orf69	Q8N8R5	385 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	KIFC2	Q96AC6	838 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	SLC10A4	Q96EP9	437 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	RRP36	Q96EU6	259 aa	Known RBP	13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	CHAMP1	Q96JM3	812 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	SPZ1	Q9BXG8	430 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	TANGO6	Q9C0B7	1094 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	KIAA1683	Q9H0B3	1180 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	JMJD4	Q9H9V9	463 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	KCNJ14	Q9UNX9	436 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	KIF3A	Q9Y496	699 aa		13.55	□□□□□ -0.24
SAFB2-209	ENST00000591123	RLF	Q13129	1914 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	BRD1	O95696	1058 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	ZSCAN22	P10073	491 aa	Predicted RBP	13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	SCG2	P13521	617 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	VCAM1	P19320	739 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	PDC	P20941	246 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	GJA5	P36382	358 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	USP14	P54578	494 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	NUCB2	P80303	420 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	TRIM29	Q14134	588 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	LDLRAD1	Q5T700	205 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	KRT40	Q6A162	431 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	GADL1	Q6ZQY3	521 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	ERO1B	Q86YB8	467 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	WASF1	Q92558	559 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	SHISA4	Q96DD7	197 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	RIOX1	Q9H6W3	641 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	CREBZF	Q9NS37	354 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	TMOD4	Q9NZQ9	345 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	SEC63	Q9UGP8	760 aa	Known RBP	13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	SYNPO2	Q9UMS6	1093 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	STK24	Q9Y6E0	443 aa		13.54	□□□□□ -0.24
SAFB2-209	ENST00000591123	SPDYE5	A6NIY4	337 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	IRF6	O14896	467 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	WDR46	O15213	610 aa	Known RBP	13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	CDC37	Q16543	378 aa	Predicted RBP	13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	PFKFB3	Q16875	520 aa	Predicted RBP	13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	WWC2	Q6AWC2	1192 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	CCDC174	Q6PII3	467 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	TNPO1	Q92973	898 aa	Known RBP	13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	COA7	Q96BR5	231 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	FAM212A	Q96EL1	285 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	PRR12	Q9ULL5	1215 aa		13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	WDR33	Q9C0J8	1336 aa	Known RBP	13.53	□□□□□ -0.24
SAFB2-209	ENST00000591123	C19orf81	C9J6K1	198 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	F13A1	P00488	732 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	STAT2	P52630	851 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	PPAT	Q06203	517 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	PPIL2	Q13356	520 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	QRICH1	Q2TAL8	776 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	TREML2	Q5T2D2	321 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	SMC1B	Q8NDV3	1235 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	LPAR1	Q92633	364 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	WNK4	Q96J92	1243 aa		13.52	□□□□□ -0.25
SAFB2-209	ENST00000591123	KIF28P	B7ZC32	967 aa		13.51	□□□□□ -0.25
SAFB2-209	ENST00000591123	STXBP3	O00186	592 aa		13.51	□□□□□ -0.25
SAFB2-209	ENST00000591123	ADAMTS3	O15072	1205 aa		13.51	□□□□□ -0.25
SAFB2-209	ENST00000591123	PPP1R11	O60927	126 aa	Predicted RBP	13.51	□□□□□ -0.25
SAFB2-209	ENST00000591123	FLOT1	O75955	427 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms