RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LOC102724428A0A0B4J2F2 783 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 KRT13P13646 458 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 MNAT1P51948 309 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 SIK1P57059 783 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 NAP1L4Q99733 375 aaKnown RBP19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 NLRC4Q9NPP4 1024 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 KLRF2D3W0D1 207 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 PCDHA4Q9UN74 947 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 RWDD2AQ9UIY3 292 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 DPF2Q92785 391 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 SLC39A2Q9NP94 309 aa19.06■□□□□ 0.64
SMARCA4-215ENST00000590574 CETN2P41208 172 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 HERC4Q5GLZ8 1057 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 ANKRD7Q92527 254 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 GGA1Q9UJY5 639 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 TMEM110-MUSTN1A8MSY1 372 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 IFT20Q8IY31 132 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 TRIM58Q8NG06 486 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 GIMAP7Q8NHV1 300 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 RBM17Q96I25 401 aaKnown RBP19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 TUBGCP2Q9BSJ2 902 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 ATP8A2Q9NTI2 1148 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 TERF2Q15554 542 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 SFMBT2Q5VUG0 894 aa19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-215ENST00000590574 NEK8Q86SG6 692 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 PLEKHA4Q9H4M7 779 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 RPL13P26373 211 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 METTL16Q86W50 562 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 CETN3O15182 167 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 VWA3BQ502W6 1294 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 ZNF710Q8N1W2 664 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 CNOT6LQ96LI5 555 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 HINFPQ9BQA5 517 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 RASAL2Q9UJF2 1139 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 CDHR2Q9BYE9 1310 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 MFAP3LO75121 409 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 GBP2P32456 591 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 GALNT17Q6IS24 598 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 OTUD6BQ8N6M0 293 aa19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 UBLCP1Q8WVY7 318 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-215ENST00000590574 FRMPD2Q68DX3 1309 aaPredicted RBP19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 ANTXR2P58335 489 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 IQCDQ96DY2 449 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 MYO1AQ9UBC5 1043 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 EPB41P11171 864 aaKnown RBP19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 PLS1Q14651 629 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 KRT31Q15323 416 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 ABCC12Q96J65 1359 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 GUCY1A2P33402 732 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 CFAP221Q4G0U5 840 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 CERS3Q8IU89 383 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 CPDO75976 1380 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 KLHL30Q0D2K2 578 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 HS2ST1Q7LGA3 356 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 ENGASEQ8NFI3 743 aa19.03■□□□□ 0.64
SMARCA4-215ENST00000590574 MYO5BQ9ULV0 1848 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 CTIFO43310 598 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 EEF1GP26641 437 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 HPDP32754 393 aaPredicted RBP19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 KLHL7Q8IXQ5 586 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 CCDC155Q8N6L0 562 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 RIPOR2Q9Y4F9 1068 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 PRPHP41219 470 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 GTF2A1P52655 376 aaPredicted RBP19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 HAUS3Q68CZ6 603 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 SGMS1Q86VZ5 419 aa19.02■□□□□ 0.64
SMARCA4-215ENST00000590574 NCAPH2Q6IBW4 605 aa19.02■□□□□ 0.63
SMARCA4-215ENST00000590574 MORC2Q9Y6X9 1032 aaPredicted RBP19.02■□□□□ 0.63
SMARCA4-215ENST00000590574 SIGLEC1Q9BZZ2 1709 aa19.02■□□□□ 0.63
SMARCA4-215ENST00000590574 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.63
SMARCA4-215ENST00000590574 CCDC151A5D8V7 595 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 BUB1O43683 1085 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 ALX1Q15699 326 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 TCP11X2Q5H9J9 407 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 RBM43Q6ZSC3 357 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 MROH7-TTC4A0A0A0MT08 1334 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 FAM71BQ8TC56 605 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 ZNF804BA4D1E1 1349 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 CUL4BQ13620 913 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 ARFGAP2Q8N6H7 521 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 SMIM23A6NLE4 172 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 EPC1Q9H2F5 836 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
SMARCA4-215ENST00000590574 NDUFAB1O14561 156 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 SELENOSQ9BQE4 189 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 MKRN1Q9UHC7 482 aaKnown RBP19■□□□□ 0.63
SMARCA4-215ENST00000590574 HYOU1Q9Y4L1 999 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 SEMA3EO15041 775 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 CALUO43852 315 aaPredicted RBP19■□□□□ 0.63
SMARCA4-215ENST00000590574 MYOCDQ8IZQ8 938 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 BRINP3Q76B58 766 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 CCDC121Q6ZUS5 278 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms