RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ADORA2AP29274 412 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 STAT3P40763 770 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 TTBK2Q6IQ55 1244 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 STOX1Q6ZVD7 989 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 ESR2Q92731 530 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 ESYT1Q9BSJ8 1104 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
DDX39A-212ENST00000590260 MROH8Q9H579 483 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 ZNF536O15090 1300 aa21.5■■□□□ 1.03
DDX39A-212ENST00000590260 ATP2A1O14983 1001 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 PLA2G6O60733 806 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 SLC1A4P43007 532 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 GJA8P48165 433 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 CACNB2Q08289 660 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-212ENST00000590260 COL9A3Q14050 684 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-212ENST00000590260 PPP4R3BQ5MIZ7 849 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 CYB5R4Q7L1T6 521 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 RAVER2Q9HCJ3 691 aaKnown RBP21.49■■□□□ 1.03
DDX39A-212ENST00000590260 MTMR7Q9Y216 660 aa21.49■■□□□ 1.03
DDX39A-212ENST00000590260 SNHG28P0DPA3 235 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 SNAP25P60880 206 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 UBE2Q1Q7Z7E8 422 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 U2AF1L4Q8WU68 220 aaKnown RBP21.48■■□□□ 1.03
DDX39A-212ENST00000590260 ANKS1AQ92625 1134 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 TTC14Q96N46 770 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.48■■□□□ 1.031e-7■■□□□ 11.6
DDX39A-212ENST00000590260 CWC22Q9HCG8 908 aaKnown RBP21.48■■□□□ 1.03
DDX39A-212ENST00000590260 IVNS1ABPQ9Y6Y0 642 aa21.48■■□□□ 1.03
DDX39A-212ENST00000590260 STRNO43815 780 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 SLC25A27O95847 323 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 PDHBP11177 359 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 PRKAR2AP13861 404 aaKnown RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 ZKSCAN1P17029 563 aaPredicted RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 STAT2P52630 851 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 SNRNP48Q6IEG0 339 aaKnown RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 ABRAQ8N0Z2 381 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 CPXCR1Q8N123 301 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 ENAHQ8N8S7 591 aaPredicted RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 DCAF4Q8WV16 495 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 DEFB118Q96PH6 123 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 TEX13BQ9BXU2 312 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 PRR12Q9ULL5 1215 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 U3KPZ7 1027 aaPredicted RBP21.47■■□□□ 1.03
DDX39A-212ENST00000590260 PLXNA1Q9UIW2 1896 aa21.47■■□□□ 1.03
DDX39A-212ENST00000590260 FRMPD3Q5JV73 1810 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 SGPL1O95470 568 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 TAL1P17542 331 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-212ENST00000590260 CCND3P30281 292 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-212ENST00000590260 BTNL9Q6UXG8 535 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 FAM160B2Q86V87 743 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 DGKHQ86XP1 1220 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 TRPV1Q8NER1 839 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 ZSCAN10Q96SZ4 725 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-212ENST00000590260 CRISPLD2Q9H0B8 497 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 FRMPD2Q68DX3 1309 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-212ENST00000590260 RPTORQ8N122 1335 aa21.46■■□□□ 1.03
DDX39A-212ENST00000590260 E7EWF7 191 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 ZBED4O75132 1171 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 PGK2P07205 417 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 CYP2C19P33261 490 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 SLC16A2P36021 539 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 SEC23AQ15436 765 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 KRT23Q9C075 422 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 TNKSO95271 1327 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 SMCHD1A6NHR9 2005 aa21.45■■□□□ 1.02
DDX39A-212ENST00000590260 NEFLP07196 543 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 FCER1AP12319 257 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 NT5C2P49902 561 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 MNX1P50219 401 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-212ENST00000590260 CCDC96Q2M329 555 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 ZNF792Q3KQV3 632 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDX39A-212ENST00000590260 TRMT44Q8IYL2 757 aaKnown RBP21.44■■□□□ 1.02
DDX39A-212ENST00000590260 CHURC1Q8WUH1 139 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 MAML3Q96JK9 1138 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 AGBL1Q96MI9 1066 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 MMP19Q99542 508 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 SENP2Q9HC62 589 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 HMX1Q9NP08 348 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-212ENST00000590260 GPCPD1Q9NPB8 672 aa21.44■■□□□ 1.02
DDX39A-212ENST00000590260 OAZ1P54368 228 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 ANTXR2P58335 489 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 ZNF543Q08ER8 600 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 OLFML2BQ68BL8 750 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 DPP9Q86TI2 863 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 FGD4Q96M96 766 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 RANBP17Q9H2T7 1088 aaKnown RBP21.43■■□□□ 1.02
DDX39A-212ENST00000590260 CPVLQ9H3G5 476 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 CNNM2Q9H8M5 875 aa21.43■■□□□ 1.02
DDX39A-212ENST00000590260 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
DDX39A-212ENST00000590260 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 LCTP09848 1927 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 NECTIN1Q15223 517 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 LHX8Q68G74 356 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 IQCA1Q86XH1 822 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 PNMA1Q8ND90 353 aa21.42■■□□□ 1.02
DDX39A-212ENST00000590260 GOLGA8HP0CJ92 632 aa21.41■■□□□ 1.02
DDX39A-212ENST00000590260 CYBAP13498 195 aa21.41■■□□□ 1.02
DDX39A-212ENST00000590260 COPB2P35606 906 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms