RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 NECAB2Q7Z6G3 386 aa16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
NEDD4L-228ENST00000590248 TMEM232C9JQI7 657 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 ORC4O43929 436 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 IGHA2P01877 340 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 FGRP09769 529 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 ANKLE1Q8NAG6 615 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
NEDD4L-228ENST00000590248 ZBED4O75132 1171 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 SNAP25P60880 206 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 KCTD1Q719H9 257 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 TBC1D10CQ8IV04 446 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 ABRAQ8N0Z2 381 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 IL25Q9H293 177 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 PCDH10Q9P2E7 1040 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
NEDD4L-228ENST00000590248 EVI5O60447 810 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 CAPN2P17655 700 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 SLC1A4P43007 532 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 KCTD2Q14681 263 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 OLFML2BQ68BL8 750 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-228ENST00000590248 PFASO15067 1338 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 CYBAP13498 195 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 TTC22Q5TAA0 569 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
NEDD4L-228ENST00000590248 ZNF213O14771 459 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 NOVP48745 357 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 STAT2P52630 851 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 HABP4Q5JVS0 413 aaKnown RBP16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 TTBK2Q6IQ55 1244 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 RCSD1Q6JBY9 416 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 HOMER2Q9NSB8 354 aa16.23■□□□□ 0.19
NEDD4L-228ENST00000590248 ZMYM6O95789 1325 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 NEDD4P46934 1319 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 HIP1O00291 1037 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 TAL1P17542 331 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 SLC16A2P36021 539 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 CCDC174Q6PII3 467 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 C7orf61Q8IZ16 206 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 CHURC1Q8WUH1 139 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 DDX11Q96FC9 970 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 NR2E3Q9Y5X4 410 aa16.22■□□□□ 0.19
NEDD4L-228ENST00000590248 ZNF536O15090 1300 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 TOP1P11387 765 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 COL6A1P12109 1028 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 COPB2P35606 906 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 GJC2Q5T442 439 aaPredicted RBP16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 TINF2Q9BSI4 451 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
NEDD4L-228ENST00000590248 B4E1Z4 1266 aa16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 SEPT4O43236 478 aa16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 ANKRD35Q8N283 1001 aa16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 SENP6Q9GZR1 1112 aaPredicted RBP16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 ZMYND8Q9ULU4 1186 aaPredicted RBP16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-228ENST00000590248 MYH6P13533 1939 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 DNAH12Q6ZR08 3092 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 MSCO60682 206 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 SLC34A2O95436 690 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 ALAS1P13196 640 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 SYN1P17600 705 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 OAZ1P54368 228 aa16.19■□□□□ 0.18
NEDD4L-228ENST00000590248 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms