RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 REPS2Q8NFH8 660 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 TMEM47Q9BQJ4 181 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 IL25Q9H293 177 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 RAVER2Q9HCJ3 691 aaKnown RBP14.24□□□□□ -0.13
TPM4-212ENST00000590180 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
TPM4-212ENST00000590180 KDM4AO75164 1064 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
TPM4-212ENST00000590180 NEFLP07196 543 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 PGK2P07205 417 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 CAPN2P17655 700 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 CNGA1P29973 690 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 CCND3P30281 292 aaPredicted RBP14.23□□□□□ -0.13
TPM4-212ENST00000590180 CYP2C19P33261 490 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 STAT2P52630 851 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 ABRAQ8N0Z2 381 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 DPF3Q92784 378 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 TTC14Q96N46 770 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
TPM4-212ENST00000590180 GREB1LQ9C091 1923 aaPredicted RBP14.23□□□□□ -0.13
TPM4-212ENST00000590180 RAD50Q92878 1312 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 RLFQ13129 1914 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 B4E1Z4 1266 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 FDX1P10109 184 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 NOVP48745 357 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 PTH1RQ03431 593 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 CCDC178Q5BJE1 867 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 MAP3K21Q5TCX8 1036 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 SKAP1Q86WV1 359 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 IQCA1Q86XH1 822 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 DCAF4Q8WV16 495 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 KRT23Q9C075 422 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 RIPK3Q9Y572 518 aa14.22□□□□□ -0.13
TPM4-212ENST00000590180 MYH4Q9Y623 1939 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 NEDD4P46934 1319 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 PLXNB2O15031 1838 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 SNAP25P60880 206 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 TTBK2Q6IQ55 1244 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 CCDC174Q6PII3 467 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 ZSWIM5Q9P217 1185 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 CENPFP49454 3210 aa14.21□□□□□ -0.13
TPM4-212ENST00000590180 FRMPD2Q68DX3 1309 aaPredicted RBP14.2□□□□□ -0.14
TPM4-212ENST00000590180 ATP2A1O14983 1001 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 SGSM2O43147 1006 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 PLA2G6O60733 806 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 SLC16A2P36021 539 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 NT5C2P49902 561 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 OAZ1P54368 228 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 TRDNQ13061 729 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 PRAMEF19Q5SWL8 479 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 ANKRD35Q8N283 1001 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
TPM4-212ENST00000590180 MAML3Q96JK9 1138 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 AGBL1Q96MI9 1066 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 HTATIP2Q9BUP3 242 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 CNNM2Q9H8M5 875 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 HOMER2Q9NSB8 354 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
TPM4-212ENST00000590180 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
TPM4-212ENST00000590180 PRPF38BQ5VTL8 546 aaKnown RBP14.19□□□□□ -0.14
TPM4-212ENST00000590180 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
TPM4-212ENST00000590180 CHST13Q8NET6 341 aa14.19□□□□□ -0.14
TPM4-212ENST00000590180 ZSCAN10Q96SZ4 725 aaPredicted RBP14.19□□□□□ -0.14
TPM4-212ENST00000590180 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
TPM4-212ENST00000590180 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
TPM4-212ENST00000590180 FBXO40Q9UH90 709 aa14.19□□□□□ -0.14
TPM4-212ENST00000590180 ALAS1P13196 640 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 ZNF792Q3KQV3 632 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 SYDE2Q5VT97 1194 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 LHX8Q68G74 356 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 UBE2Q1Q7Z7E8 422 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 TRPV1Q8NER1 839 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 DIS3LQ8TF46 1054 aaKnown RBP14.18□□□□□ -0.14
TPM4-212ENST00000590180 DDX20Q9UHI6 824 aaKnown RBP14.18□□□□□ -0.14
TPM4-212ENST00000590180 OGDHLQ9ULD0 1010 aa14.18□□□□□ -0.14
TPM4-212ENST00000590180 DIS3Q9Y2L1 958 aaKnown RBP14.18□□□□□ -0.14
TPM4-212ENST00000590180 RBBP6Q7Z6E9 1792 aaKnown RBP14.18□□□□□ -0.14
TPM4-212ENST00000590180 CEP290O15078 2479 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 CYP21A2P08686 494 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 PDHBP11177 359 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 TKFCQ3LXA3 575 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 BTNL9Q6UXG8 535 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 PNMA1Q8ND90 353 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 MAP4K1Q92918 833 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 TINF2Q9BSI4 451 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms